RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 UGT1A4P22310 534 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 HRH2P25021 359 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 UGT1A3P35503 534 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 UGT1A5P35504 534 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 IST1P53990 364 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 YWHAHQ04917 246 aaPredicted RBP16.79■□□□□ 0.28
RTN1-201ENST00000267484 EFEMP1Q12805 493 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 PPP1R8Q12972 351 aaKnown RBP16.79■□□□□ 0.28
RTN1-201ENST00000267484 RAP1GAP2Q684P5 730 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 PRMT9Q6P2P2 845 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 CD300LGQ6UXG3 332 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 SYVN1Q86TM6 617 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 LZICQ8WZA0 190 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 PKMYT1Q99640 499 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 ZFYVE28Q9HCC9 887 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 FAIMQ9NVQ4 179 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 A0A1W2PP18 115 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 HAS3O00219 553 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 RHOBTB1O94844 696 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 KCNH1O95259 989 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 FAM163BP0C2L3 166 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 TCF3P15923 654 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 SELPLGQ14242 412 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 ANKRD34AQ69YU3 496 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 NANOGP8Q6NSW7 305 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 BPIFB6Q8NFQ5 453 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 GABPB2Q8TAK5 448 aaPredicted RBP16.79■□□□□ 0.28
RTN1-201ENST00000267484 PPM1MQ96MI6 270 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 NANOGQ9H9S0 305 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 MYADML2A6NDP7 307 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 CCDC154A6NI56 674 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 TNFRSF10BO14763 440 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 LDLRP01130 860 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 IDO1P14902 403 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 SHMT2P34897 504 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 PIGFQ07326 219 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 ATP1A4Q13733 1029 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 MS4A13Q5J8X5 152 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.79■□□□□ 0.28
RTN1-201ENST00000267484 FANCEQ9HB96 536 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 PTBP2Q9UKA9 531 aaKnown RBP16.79■□□□□ 0.28
RTN1-201ENST00000267484 CAPN15O75808 1086 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 PAPSS2O95340 614 aaPredicted RBP16.78■□□□□ 0.28
RTN1-201ENST00000267484 MATN4O95460 622 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 ZBTB11O95625 1053 aaPredicted RBP16.78■□□□□ 0.28
RTN1-201ENST00000267484 MTPNP58546 118 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 LCP2Q13094 533 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 PTPRRQ15256 657 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
RTN1-201ENST00000267484 SLC39A12Q504Y0 691 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 LDLRAP1Q5SW96 308 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 ADAMTS16Q8TE57 1224 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 ARMC7Q9H6L4 198 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 H0Y858 1186 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 HMOX2P30519 316 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 GRK4P32298 578 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 RBBP7Q16576 425 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 SETMARQ53H47 684 aaPredicted RBP16.78■□□□□ 0.28
RTN1-201ENST00000267484 ERLEC1Q96DZ1 483 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 FAM210AQ96ND0 272 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 TLR9Q9NR96 1032 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 CATSPERZQ9NTU4 200 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 MED16Q9Y2X0 877 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 CORINQ9Y5Q5 1042 aa16.78■□□□□ 0.28
RTN1-201ENST00000267484 MGEA5O60502 916 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 TSPAN3O60637 253 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 SOAT2O75908 522 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 GPIP06744 558 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 MRPS6P82932 125 aaKnown RBP16.77■□□□□ 0.28
RTN1-201ENST00000267484 GNA12Q03113 381 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 GFM2Q969S9 779 aaKnown RBP16.77■□□□□ 0.28
RTN1-201ENST00000267484 EXOC2Q96KP1 924 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 TRIM64A6NGJ6 449 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 BTN3A1O00481 513 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 RSL1D1O76021 490 aaKnown RBP16.77■□□□□ 0.28
RTN1-201ENST00000267484 IL7RP16871 459 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 DCKP27707 260 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 TPP2P29144 1249 aaPredicted RBP16.77■□□□□ 0.28
RTN1-201ENST00000267484 RCAN2Q14206 197 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 CROCCP3Q8IVE0 287 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 HS3ST5Q8IZT8 346 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 UMODL1-AS1Q8N2C9 162 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 CDYL2Q8N8U2 506 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 OR4L1Q8NH43 312 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 PPP1R2P1Q96PQ5 205 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 GPR21Q99679 349 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 ZYG11BQ9C0D3 744 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 ADNPQ9H2P0 1102 aa16.77■□□□□ 0.28
RTN1-201ENST00000267484 SLC22A3O75751 556 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 CHRNA1P02708 482 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 ZNF865P0CJ78 1059 aaPredicted RBP16.77■□□□□ 0.27
RTN1-201ENST00000267484 LDLRAD1Q5T700 205 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 ANKRD26P1Q6NSI1 321 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 MRNIPQ6NTE8 343 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 FBXL22Q6P050 247 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 KLHDC9Q8NEP7 349 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 AARSD1Q9BTE6 412 aaKnown RBP16.77■□□□□ 0.27
RTN1-201ENST00000267484 TRIM54Q9BYV2 358 aa16.77■□□□□ 0.27
RTN1-201ENST00000267484 ZNHIT2Q9UHR6 403 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms