RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 COLEC11Q9BWP8 271 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 RPS6KA4O75676 772 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
CHFR-201ENST00000266880 RPL35P42766 123 aaKnown RBP11.12□□□□□ -0.63
CHFR-201ENST00000266880 PHB2Q99623 299 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 GTPBP2Q9BX10 602 aaKnown RBP11.12□□□□□ -0.63
CHFR-201ENST00000266880 BPIFA1Q9NP55 256 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 SLC17A7Q9P2U7 560 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 SMARCD3Q6STE5 483 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 IL22Q9GZX6 179 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 PLEKHA1Q9HB21 404 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 NECTIN3Q9NQS3 549 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 MAP4K5Q9Y4K4 846 aa11.12□□□□□ -0.63
CHFR-201ENST00000266880 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
CHFR-201ENST00000266880 CPSF1Q10570 1443 aaKnown RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 BUD23O43709 281 aaKnown RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 PGLSO95336 258 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 PARP6Q2NL67 630 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 STK40Q8N2I9 435 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 C12orf71A8MTZ7 269 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 GSC2O15499 205 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 IGSF6O95976 241 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 IGKV5-2P06315 115 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 PITPNAQ00169 270 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 H0YJX3 145 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 MEN1O00255 615 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 IL1R1P14778 569 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 RBL1P28749 1068 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 GNG2P59768 71 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 PPP3R1P63098 170 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 RNF151Q2KHN1 245 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 GFOD2Q3B7J2 385 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ZNF517Q6ZMY9 492 aaPredicted RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 LRTOMTQ8WZ04 291 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 LRRIQ1Q96JM4 1722 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 CENPBD1B2RD01 187 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 CALCAP01258 141 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 MIPP30301 263 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ILF2Q12905 390 aaKnown RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 GALNT7Q86SF2 657 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 MPP5Q8N3R9 675 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 OXR1Q8N573 874 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 B3GNT4Q9C0J1 378 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 SOHLH2Q9NX45 425 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 ATP6AP2A0A1C7CYW4 349 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ATP6AP2O75787 350 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 COL6A1P12109 1028 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 KLHL26Q53HC5 615 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 MTMR10Q9NXD2 777 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ZNF780BQ9Y6R6 833 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 A0A0G2JLW4 131 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 PDE2AO00408 941 aaPredicted RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 CCNYL2Q5T2Q4 361 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ARMC12Q5T9G4 340 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 REP15Q6BDI9 236 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 BEND5Q7L4P6 421 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 KATNAL2Q8IYT4 538 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ZNF398Q8TD17 642 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 NR2E1Q9Y466 385 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ZNF705EA8MWA4 302 aaPredicted RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 DHX15O43143 795 aaKnown RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 HBP1O60381 514 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 CXCL8P10145 99 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ACADVLP49748 655 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 LSM12Q3MHD2 195 aaKnown RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 STXBP5Q5T5C0 1151 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 RASGEF1AQ8N9B8 481 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 RAB2BQ8WUD1 216 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ZNF226Q9NYT6 803 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 FBXL3Q9UKT7 428 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 RBAK-RBAKDNI3L0D1 243 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 PER2O15055 1255 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ANXA5P08758 320 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 CLCN3P51790 818 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 ZNF563Q8TA94 476 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 PPCDCQ96CD2 204 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 TTC3P53804 2025 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 SCGB2B2Q4G0G5 96 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 RAP1GAP2Q684P5 730 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 SLC25A25Q6KCM7 469 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
CHFR-201ENST00000266880 KAT8Q9H7Z6 458 aaKnown RBP11.11□□□□□ -0.63
CHFR-201ENST00000266880 PTPN6P29350 595 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 HOXD12P35452 270 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 RAB10P61026 200 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 SSTP61278 116 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 EIF5AP63241 154 aaKnown RBP11.1□□□□□ -0.63
CHFR-201ENST00000266880 UNC5AQ6ZN44 842 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 COQ8BQ96D53 544 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 HSPBAP1Q96EW2 488 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 RIT2Q99578 217 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 TNFRSF11BO00300 401 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 HDAC3O15379 428 aa11.1□□□□□ -0.63
CHFR-201ENST00000266880 NOBOXO60393 691 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms