RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ATP6AP1Q15904 470 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 TRIM60Q495X7 471 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 KCTD21Q4G0X4 260 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 ACBD5Q5T8D3 534 aaPredicted RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 TRPC4APQ8TEL6 797 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CCT7Q99832 543 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 AIG1Q9NVV5 245 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 SPO11Q9Y5K1 396 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 OAS3Q9Y6K5 1087 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 ANKRD36A6QL64 1941 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 DHRS12A0PJE2 317 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 NDST3O95803 873 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 HGFP14210 728 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 IDO1P14902 403 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 CCT8P50990 548 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 EMP3P54852 163 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 NME5P56597 212 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 GALNT3Q14435 633 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 CYTH1Q15438 398 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 KIF19Q2TAC6 998 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 CLLU1OSQ5K130 101 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 PAQR3Q6TCH7 311 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 SPATA19Q7Z5L4 167 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 RAB44Q7Z6P3 723 aaPredicted RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 SPPL2CQ8IUH8 684 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 CMTR2Q8IYT2 770 aaKnown RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 TRPV3Q8NET8 790 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 STAG3L4Q8TBR4 150 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 BLOC1S5Q8TDH9 187 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 TEX37Q96LM6 180 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 MGME1Q9BQP7 344 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 NUSAP1Q9BXS6 441 aaKnown RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 BRINP2Q9C0B6 783 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 OLA1Q9NTK5 396 aaKnown RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 SMOXQ9NWM0 555 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 TUBA8Q9NY65 449 aaPredicted RBP12.37□□□□□ -0.43
BEST3-201ENST00000266661 SLC8A2Q9UPR5 921 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 ATP11BQ9Y2G3 1177 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 ST14Q9Y5Y6 855 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 CHD5Q8TDI0 1954 aa12.37□□□□□ -0.43
BEST3-201ENST00000266661 A0A1W2PP18 115 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 STX16O14662 325 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 ARPC2O15144 300 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 ECI2O75521 394 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 VNN2O95498 520 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 TSPAN12O95859 305 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 PRLP01236 227 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 LINC00032P0C843 101 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 C7P10643 843 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 NELFEP18615 380 aaKnown RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 UGT1A6P19224 532 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 CD9P21926 228 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 EEF1DP29692 281 aaKnown RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 OXTRP30559 389 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 DIO3P55073 304 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 FAM189BP81408 668 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 RCAN2Q14206 197 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 CAPRIN1Q14444 709 aaKnown RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 SLC36A3Q495N2 470 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 TBCELQ5QJ74 424 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 CAMK1DQ8IU85 385 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 ERI1Q8IV48 349 aaKnown RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 RYBPQ8N488 228 aaPredicted RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 CBR4Q8N4T8 237 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 DRAXINQ8NBI3 349 aaPredicted RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 LINC01599Q8WXQ3 324 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 EXT2Q93063 718 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 TUBGCP3Q96CW5 907 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 RMND5BQ96G75 393 aaPredicted RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 TRIM54Q9BYV2 358 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 TRIM15Q9C019 465 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 MUC13Q9H3R2 512 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 CAAP1Q9H8G2 361 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 CLK4Q9HAZ1 481 aaKnown RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 SYTL2Q9HCH5 934 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 TIMMDC1Q9NPL8 285 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 GID8Q9NWU2 228 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 MARCH2Q9P0N8 246 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 THEGQ9P2T0 379 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 PTBP2Q9UKA9 531 aaKnown RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 BTRCQ9Y297 605 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 PCDHB5Q9Y5E4 795 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 TET1Q8NFU7 2136 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 C9JVG2 144 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 H3BNC9 293 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 GPIP06744 558 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 GNAO1P09471 354 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 PIRTP0C851 137 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 GFAPP14136 432 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 CR2P20023 1033 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 PRDX3P30048 256 aaKnown RBP12.36□□□□□ -0.43
BEST3-201ENST00000266661 GSK3BP49841 420 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 NAA20P61599 178 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 TLE2Q04725 743 aa12.36□□□□□ -0.43
BEST3-201ENST00000266661 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms