RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 C11orf49Q9H6J7 331 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 SPG21Q9NZD8 308 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 SLC13A4Q9UKG4 626 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 VWA7Q9Y334 891 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 CAPN14A8MX76 684 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 BHMG1C9JSJ3 638 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 TFPTP0C1Z6 253 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 THRBP10828 461 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 DPYSL2Q16555 572 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PABPC1LQ4VXU2 614 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 RNF19BQ6ZMZ0 732 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 KBTBD6Q86V97 674 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 CCDC185Q8N715 623 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 SCAIQ8N9R8 606 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 COQ7Q99807 217 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 ZBTB26Q9HCK0 441 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PTBP2Q9UKA9 531 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PADI4Q9UM07 663 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 OAZ3Q9UMX2 235 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PSAT1Q9Y617 370 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 GABRDO14764 452 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ANXA6P08133 673 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 CLTBP09497 229 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ATP6V1E1P36543 226 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 STT3AP46977 705 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ACADVLP49748 655 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MPP1Q00013 466 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 LRRC74AQ0VAA2 488 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 GLYATQ6IB77 296 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 IL27RAQ6UWB1 636 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 AADATQ8N5Z0 425 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 UTP15Q8TED0 518 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MRPS31Q92665 395 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 PROX1Q92786 737 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MTERF3Q96E29 417 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MSRAQ9UJ68 235 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 GNPTGQ9UJJ9 305 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 NRP1O14786 923 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 NPHS1O60500 1241 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 SNNO75324 88 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 IRF1P10914 325 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ALOX15P16050 662 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 TPTEP56180 551 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 HTRA3P83110 453 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 LIPEQ05469 1076 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MFSD4BQ5TF39 518 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 PROSER1Q86XN7 944 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 CPSF7Q8N684 471 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 PACRGLQ8N7B6 248 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 BHMTQ93088 406 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 TOP1MTQ969P6 601 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 HDAC10Q969S8 669 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ISOC1Q96CN7 298 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ALG2Q9H553 416 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MRPL17Q9NRX2 175 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 CACNA2D2Q9NY47 1150 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MARCH2Q9P0N8 246 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MAGEL2Q9UJ55 1249 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 GMPPBQ9Y5P6 360 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 G3V2T6 193 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MAGEB3O15480 346 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 HTRA2O43464 458 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ALDOAP04075 364 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 MAGP20916 626 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 YAP1P46937 504 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 NDUFV1P49821 464 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ZNF460Q14592 562 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 PGS1Q32NB8 556 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 FBXO46Q6PJ61 603 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 FAM45AQ8TCE6 357 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 GPR63Q9BZJ6 419 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 RERGLQ9H628 205 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 CACNG4Q9UBN1 327 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 FAM8A1Q9UBU6 413 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 ZDHHC2Q9UIJ5 367 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 TBC1D30Q9Y2I9 924 aa11.47□□□□□ -0.57
CLSTN3-201ENST00000266546 AQP12BA6NM10 295 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 M0QZQ0 153 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 CD3EAPO15446 510 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 TPD52L2O43399 206 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 HCRTO43612 131 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 TSPAN3O60637 253 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 SLC22A3O75751 556 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 RNASEH2AO75792 299 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 KCNH1O95259 989 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 NMBRP28336 390 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 IL12AP29459 219 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 MAGEA11P43364 429 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 SEPHS1P49903 392 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 RABGGTBP53611 331 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 ILF2Q12905 390 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 PPIGQ13427 754 aaKnown RBP eCLIP11.46□□□□□ -0.571e-6■■□□□ 13.3
CLSTN3-201ENST00000266546 TMEM214Q6NUQ4 689 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 AQP12AQ8IXF9 295 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 FAM9CQ8IZT9 166 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 CENPSQ8N2Z9 138 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms