RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ERLEC1Q96DZ1 483 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 ITM2AO43736 263 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 STBD1O95210 358 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 LRATO95237 230 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 RPS7P62081 194 aaKnown RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 MRPS15P82914 257 aaKnown RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 FAM182AQ5T1J6 154 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 BROXQ5VW32 411 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 CAND1Q86VP6 1230 aaKnown RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 CCL16O15467 120 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 GPR32O75388 356 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 TIPRLO75663 272 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 CLDN9O95484 217 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 PEX6Q13608 980 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 GTF2H2Q13888 395 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 SLC9B1Q4ZJI4 515 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 NAIF1Q69YI7 327 aaPredicted RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 GTF2H2CQ6P1K8 395 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 SIDT2Q8NBJ9 832 aaKnown RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 SYT11Q9BT88 431 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 FAIM2Q9BWQ8 316 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 TJP1Q07157 1748 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 CAPN8A6NHC0 703 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 C9IYK1 514 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 E7ESA3 106 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 TYROBPO43914 113 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 VAV1P15498 845 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 ITGA2P17301 1181 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 IMPDH1P20839 514 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 RPIAP49247 311 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 EIF2B5Q13144 721 aaKnown RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 B3GALT6Q96L58 329 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 TMEM175Q9BSA9 504 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 CLK4Q9HAZ1 481 aaKnown RBP16.62■□□□□ 0.25
PHRF1-201ENST00000264555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■□□□ 12
PHRF1-201ENST00000264555 PSME2Q9UL46 239 aa16.62■□□□□ 0.25
PHRF1-201ENST00000264555 ILVBLA1L0T0 632 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 ATG13O75143 517 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 IFNGR2P38484 337 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 ADGRF1Q5T601 910 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 CES5AQ6NT32 575 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 SPPL2CQ8IUH8 684 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 C10orf53Q8N6V4 93 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 PRKAG3Q9UGI9 489 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 ANGPT4Q9Y264 503 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 PIP5K1BO14986 540 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 HSPA7P48741 367 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 ST13P50502 369 aaKnown RBP16.61■□□□□ 0.25
PHRF1-201ENST00000264555 RPS24P62847 133 aaKnown RBP16.61■□□□□ 0.25
PHRF1-201ENST00000264555 RFX4Q33E94 735 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 MTX3Q5HYI7 312 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 MFSD4BQ5TF39 518 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 IL23RQ5VWK5 629 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 ARHGAP36Q6ZRI8 547 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 CHST9Q7L1S5 443 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 CPNE9Q8IYJ1 553 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 TMEM174Q8WUU8 243 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 FAM83DQ9H4H8 585 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 ASF1AQ9Y294 204 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
PHRF1-201ENST00000264555 SULT1C3Q6IMI6 304 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 CAPN13Q6MZZ7 669 aaPredicted RBP16.61■□□□□ 0.25
PHRF1-201ENST00000264555 GPR22Q99680 433 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 NMUR1Q9HB89 426 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 SRRDQ9UH36 339 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 DDX60Q8IY21 1712 aaKnown RBP16.61■□□□□ 0.25
PHRF1-201ENST00000264555 ITPKAP23677 461 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 SIRPB2Q5JXA9 342 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 POLR3BQ9NW08 1133 aaPredicted RBP16.61■□□□□ 0.25
PHRF1-201ENST00000264555 MIOSQ9NXC5 875 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 POMPQ9Y244 141 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 COMMD3-BMI1R4GMX3 469 aa16.61■□□□□ 0.25
PHRF1-201ENST00000264555 AHSGP02765 367 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 HPGDP15428 266 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 HERVK_113P63132 956 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 TRIM25Q14258 630 aaKnown RBP16.6■□□□□ 0.25
PHRF1-201ENST00000264555 PHKG1Q16816 387 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 GLYATQ6IB77 296 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 PAOXQ6QHF9 649 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 ZC3H7AQ8IWR0 971 aaKnown RBP16.6■□□□□ 0.25
PHRF1-201ENST00000264555 ZFP28Q8NHY6 868 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 SLC47A1Q96FL8 570 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 PPM1MQ96MI6 270 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 SLC2A13Q96QE2 648 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 ERVK-6Q9BXR3 956 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 ABCG8Q9H221 673 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 RAB26Q9ULW5 256 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 NHSL1Q5SYE7 1610 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 J3KR12 359 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 IMPDH2P12268 514 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 EPORP19235 508 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 SPIDRQ14159 915 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 OR13C4Q8NGS5 318 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 USP7Q93009 1102 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 TSSK3Q96PN8 268 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 PAIP1Q9H074 479 aaKnown RBP16.6■□□□□ 0.25
PHRF1-201ENST00000264555 CCSER2Q9H7U1 834 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 ADGRE2Q9UHX3 823 aa16.6■□□□□ 0.25
PHRF1-201ENST00000264555 KRT87PA6NCN2 255 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms