RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 C10orf120Q5SQS8 335 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 TRIM40Q6P9F5 258 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 ZNF767PQ75MW2 155 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 ANKS1BQ7Z6G8 1248 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 COMMD7Q86VX2 200 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 CEP76Q8TAP6 659 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 DPAGT1Q9H3H5 408 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 RHOJQ9H4E5 214 aa17.91■□□□□ 0.46
ITGA6-201ENST00000264107 ZNF7P17097 686 aaPredicted RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 RENBPP51606 427 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 FAM76BQ5HYJ3 339 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 COMMD2Q86X83 199 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 KAZALD1Q96I82 304 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 AMHP03971 560 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 MPZL3Q6UWV2 235 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TRPV3Q8NET8 790 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 OR7G1Q8NGA0 311 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 PTCD2Q8WV60 388 aaKnown RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 FAM126AQ9BYI3 521 aaPredicted RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 NLNQ9BYT8 704 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TBC1D17Q9HA65 648 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 AMBNQ9NP70 447 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TISP43B9A030 160 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 DISC1C4P0D8 188 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 E5RJQ4 531 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 CHP2O43745 196 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 CHRNB1P11230 501 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 RIPPLY1Q0D2K3 151 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 SPRED3Q2MJR0 410 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 MGAT5BQ3V5L5 792 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 DCDC5Q6ZRR9 648 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TWIST2Q8WVJ9 160 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 CDK5RAP1Q96SZ6 601 aaKnown RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 PCDHB18PQ96TA0 734 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TSNAXQ99598 290 aaKnown RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 ZNF350Q9GZX5 532 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 ABCG8Q9H221 673 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 COL15A1P39059 1388 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 CD40LGP29965 261 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 LIMK2P53671 638 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 PITPNAQ00169 270 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 EIF2S3LQ2VIR3 472 aaKnown RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 CLEC6AQ6EIG7 209 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 ZNF366Q8N895 744 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 OR5J2Q8NH18 312 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 STOML3Q8TAV4 291 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 S100A13Q99584 98 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TMEM168Q9H0V1 697 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TLR8Q9NR97 1041 aaKnown RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 FAM105AQ9NUU6 356 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 UQCRC1P31930 480 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 ZNF143P52747 638 aaPredicted RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TSPAN5P62079 268 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 RHDQ02161 417 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 SLC13A2Q13183 592 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 ADGRG6Q86SQ4 1221 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 IDI2Q9BXS1 227 aa17.9■□□□□ 0.46
ITGA6-201ENST00000264107 POLR2J2Q9GZM3 115 aaKnown RBP17.9■□□□□ 0.46
ITGA6-201ENST00000264107 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.46
ITGA6-201ENST00000264107 DENRO43583 198 aaKnown RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 LRATO95237 230 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 AQP1P29972 269 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 MTAPQ13126 283 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 FOXR2Q6PJQ5 311 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 FCRL4Q96PJ5 515 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 MTMR9Q96QG7 549 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 TIGARQ9NQ88 270 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 CLIC3O95833 236 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 MMP10P09238 476 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 COL6A2P12110 1019 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 ARHGDIBP52566 201 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 NDST1P52848 882 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 MARSP56192 900 aaKnown RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 SEMA5AQ13591 1074 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 HECTD3Q5T447 861 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 EFCAB12Q6NXP0 572 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 ERMP1Q7Z2K6 904 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 ZNF433Q8N7K0 673 aaPredicted RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 SNX27Q96L92 541 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 NUAK1O60285 661 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 BCAS2O75934 225 aaPredicted RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 YBX3P16989 372 aaKnown RBP eCLIP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 TNNI3P19429 210 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 NFKB1P19838 968 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 ARF3P61204 181 aaPredicted RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 ARF1P84077 181 aaKnown RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 UNC5BQ8IZJ1 945 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 CD101Q93033 1021 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 SNRNP25Q9BV90 132 aaKnown RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 FBXO5Q9UKT4 447 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 CROCC2H7BZ55 1655 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 IRF1P10914 325 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 FOSL1P15407 271 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 NOMO3P69849 1222 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 GPR153Q6NV75 609 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 PRICKLE1Q96MT3 831 aaPredicted RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 DDX4Q9NQI0 724 aaKnown RBP17.89■□□□□ 0.45
ITGA6-201ENST00000264107 TAS2R3Q9NYW6 316 aa17.89■□□□□ 0.45
ITGA6-201ENST00000264107 RNF6Q9Y252 685 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms