RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 AARSD1Q9BTE6 412 aaKnown RBP16.2■□□□□ 0.18
CTCF-201ENST00000264010 RNF208Q9H0X6 261 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 MARCH4Q9P2E8 410 aaPredicted RBP16.2■□□□□ 0.18
CTCF-201ENST00000264010 TFPTP0C1Z6 253 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 TRAF2Q12933 501 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 NFYCQ13952 458 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 PTPRCAPQ14761 206 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 ZNF789Q5FWF6 425 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 DHFR2Q86XF0 187 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 FATE1Q969F0 183 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 PSKH2Q96QS6 385 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 C1QTNF1Q9BXJ1 281 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 TM6SF2Q9BZW4 377 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 SDHDO14521 159 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 GSTA4O15217 222 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 TRIM16O95361 564 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 GSRP00390 522 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 HGFP14210 728 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 LINGO1Q96FE5 620 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 DEFB118Q96PH6 123 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 IGSF5Q9NSI5 407 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 SLC8A2Q9UPR5 921 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 SNX13Q9Y5W8 968 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 CDC16Q13042 620 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 ZBTB8BQ8NAP8 495 aaPredicted RBP16.19■□□□□ 0.18
CTCF-201ENST00000264010 KDM1BQ8NB78 822 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 OVCA2Q8WZ82 227 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 LIN28AQ9H9Z2 209 aaKnown RBP16.19■□□□□ 0.18
CTCF-201ENST00000264010 WWOXQ9NZC7 414 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 BTRCQ9Y297 605 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 PPP3CCP48454 512 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 STC1P52823 247 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 SULT2A1Q06520 285 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 CMPK2Q5EBM0 449 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 CITED4Q96RK1 184 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 CENPOQ9BU64 300 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 ARMC7Q9H6L4 198 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 MRPL17Q9NRX2 175 aaKnown RBP16.19■□□□□ 0.18
CTCF-201ENST00000264010 FKBPLQ9UIM3 349 aa16.19■□□□□ 0.18
CTCF-201ENST00000264010 RALGAPA2Q2PPJ7 1873 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 RAD51BO15315 384 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 HSPA1AP0DMV8 641 aaKnown RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 HSPA1BP0DMV9 641 aaKnown RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 MAPK8P45983 427 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 PRMT2P55345 433 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 CCDC85BQ15834 202 aaPredicted RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 AFMIDQ63HM1 303 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TPGS2Q68CL5 300 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TMEM214Q6NUQ4 689 aaKnown RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 ARRDC2Q8TBH0 407 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TWIST2Q8WVJ9 160 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 UNC93B1Q9H1C4 597 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TNPO3Q9Y5L0 923 aaKnown RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 CLASP2O75122 1294 aaKnown RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 GJB5O95377 273 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 IGSF6O95976 241 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 ITGB6P18564 788 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 THOP1P52888 689 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 LCP2Q13094 533 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TUBB3Q13509 450 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 AASDHQ4L235 1098 aaPredicted RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 RSBN1Q5VWQ0 802 aaPredicted RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 PAQR3Q6TCH7 311 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 CYP2R1Q6VVX0 501 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 CHST9Q7L1S5 443 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 DGCR14Q96DF8 476 aaKnown RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 ITM2BQ9Y287 266 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 AP4S1Q9Y587 144 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 ZSWIM8A7E2V4 1837 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 GNGT2O14610 69 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 INPPL1O15357 1258 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 CLCQ05315 142 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 HSF5Q4G112 596 aaPredicted RBP16.18■□□□□ 0.18
CTCF-201ENST00000264010 ADGRG6Q86SQ4 1221 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TEX26Q8N6G2 289 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 METTL6Q8TCB7 284 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 CASD1Q96PB1 797 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 POPDC3Q9HBV1 291 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TMEM39AQ9NV64 488 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 TBC1D30Q9Y2I9 924 aa16.18■□□□□ 0.18
CTCF-201ENST00000264010 NPEPPSL1A6NEC2 478 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 BBIP1A8MTZ0 92 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 TSC22D2O75157 780 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 BAIAP3O94812 1187 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 LINC00032P0C843 101 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 UQCRBP14927 111 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 CTPS1P17812 591 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 CPOXP36551 454 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 CDKN2DP55273 166 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 DLG1Q12959 904 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 TSNQ15631 228 aaKnown RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 TMEM53Q6P2H8 277 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 RPS27LQ71UM5 84 aaKnown RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 OR13J1Q8NGT2 312 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 SDCCAG3Q96C92 435 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 YME1L1Q96TA2 773 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 YIPF1Q9Y548 306 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 IGLV3-10A0A075B6K4 115 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 LOC285095A0A1B0GVY8 99 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 SYNCRIPO60506 623 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms