RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SPRP35270 261 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 CD151P48509 253 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 PTPN5P54829 565 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 CSE1LP55060 971 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 RPS21P63220 83 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 B4GALNT1Q00973 533 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 CREB5Q02930 508 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 TYSND1Q2T9J0 566 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 WSCD2Q2TBF2 565 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF284Q2VY69 593 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 TMEM259Q4ZIN3 620 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SETMARQ53H47 684 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 RAET1GQ6H3X3 334 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 CYP2U1Q7Z449 544 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 CMC1Q7Z7K0 106 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 HORMAD1Q86X24 394 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC41A1Q8IVJ1 513 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 NRSN1Q8IZ57 195 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 NXPE1Q8N323 547 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 DCLK2Q8N568 766 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 CLDN19Q8N6F1 224 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 GPATCH11Q8N954 259 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 GDAP1Q8TB36 358 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 LPGAT1Q92604 370 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 ELMO2Q96JJ3 720 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 LENG8Q96PV6 779 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 GPR174Q9BXC1 333 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 C1QTNF2Q9BXJ5 285 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 RHOJQ9H4E5 214 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 EBF2Q9HAK2 575 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SPATA6Q9NWH7 488 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 WSB2Q9NYS7 404 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 GALPQ9UBC7 116 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF180Q9UJW8 692 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC39A10Q9ULF5 831 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 CNOT6Q9ULM6 557 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 IGHV1OR15-9A0A0B4J2B8 117 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 IQANK1A0A1B0GTG1 560 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 FAM95CA0A1B0GW59 222 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 RGSL1A5PLK6 1076 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 AGAP14A8MT82 685 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 IQCF5A8MTL0 148 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 KRT38O76015 456 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 ACRV1P26436 265 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 GPR1P46091 355 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 SERPINB9P50453 376 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 LIMK2P53671 638 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 CDKN2DP55273 166 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 DCDC1P59894 354 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 MAGOHP61326 146 aaKnown RBP9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 SGCGQ13326 291 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF460Q14592 562 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 LRRC14Q15048 493 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 IRF4Q15306 451 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 MAP7D1Q3KQU3 841 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 GPR33Q49SQ1 333 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 TNFAIP8L3Q5GJ75 292 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 PPM1JQ5JR12 505 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 CTSL3PQ5NE16 218 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 GPRC6AQ5T6X5 926 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 ZDHHC20Q5W0Z9 365 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 KIAA0408Q6ZU52 694 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 DET1Q7L5Y6 550 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 TRABD2AQ86V40 505 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 EXOC3L1Q86VI1 746 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 CEP97Q8IW35 865 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 LMNTD2Q8IXW0 634 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 SRRM1Q8IYB3 904 aaKnown RBP9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 C4orf33Q8N1A6 199 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 TRAM1L1Q8N609 369 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 GOLGA6L1Q8N7Z2 621 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 TP53I13Q8NBR0 393 aaPredicted RBP9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 OR2T34Q8NGX1 318 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 TLCD1Q96CP7 247 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 PGM2Q96G03 612 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 ATP6V1G3Q96LB4 118 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 BIRC8Q96P09 236 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 OLFM1Q99784 485 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 C19orf43Q9BQ61 176 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 ZSCAN5AQ9BUG6 496 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 PREBQ9HCU5 417 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 RAD18Q9NS91 495 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 NSMCE4AQ9NXX6 385 aa9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 OAS3Q9Y6K5 1087 aaKnown RBP9.65□□□□□ -0.86
SNRNP40-201ENST00000263694 CEP192Q8TEP8 1941 aa9.65□□□□□ -0.87
SNRNP40-201ENST00000263694 LRRC72A6NJI9 287 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 TPP1O14773 563 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 PHGDHO43175 533 aaKnown RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 DNAJC6O75061 913 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 SPAG7O75391 227 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 RFPL1O75677 317 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 KRT37O76014 449 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 FSBPO95073 299 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC25A14O95258 325 aaPredicted RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 TOP3BO95985 862 aaKnown RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 IGLV3-19P01714 112 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 MT-ND3P03897 115 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 ALDOAP04075 364 aaKnown RBP9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 ITGB6P18564 788 aa9.64□□□□□ -0.87
SNRNP40-201ENST00000263694 CD6P30203 668 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms