RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 TRMT13Q9NUP7 481 aaKnown RBP16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 DDX18Q9NVP1 670 aaKnown RBP16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 EDF1O60869 148 aaKnown RBP16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 TOP3BO95985 862 aaKnown RBP16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 IFNGP01579 166 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 CMPK1P30085 196 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 UGT1A5P35504 534 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 KIR3DL1P43629 444 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 CHN2P52757 468 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 AMER2Q8N7J2 671 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 SLC22A17Q8WUG5 538 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 METTL21AQ8WXB1 218 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 CMTM6Q9NX76 183 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 SLC17A7Q9P2U7 560 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 PLLPQ9Y342 182 aa16.77■□□□□ 0.27
CROCCP3-201ENST00000263511 A0A0J9YYE9 177 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 C22orf31O95567 290 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ZNF132P52740 706 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 IL10RBQ08334 325 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ARMC3Q5W041 872 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 HMCESQ96FZ2 354 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 FUBP3Q96I24 572 aaKnown RBP eCLIP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ZNF354BQ96LW1 612 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 WRAP53Q9BUR4 548 aaKnown RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 SAMD4AQ9UPU9 718 aaKnown RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 REXO2Q9Y3B8 237 aaKnown RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ASNA1O43681 348 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 NRP2O60462 931 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 CLDN9O95484 217 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 RPIAP49247 311 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 SWT1Q5T5J6 900 aaKnown RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ALYREFQ86V81 257 aaKnown RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 HIPK1Q86Z02 1210 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 OR7A2PQ8NGA2 310 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 SLC47A1Q96FL8 570 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 CORO1CQ9ULV4 474 aaPredicted RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 PCDHGC4Q9Y5F7 938 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 HNRNPDQ14103 355 aaKnown RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 PRRG4Q9BZD6 226 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 BRINP2Q9C0B6 783 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ERVK-5Q9HDB9 667 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 TRBV23OR9-2A0A075B6M9 112 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ABHD14A-ACY1A0A1B0GW23 586 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 MYBPC1Q00872 1141 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 IKBIPQ70UQ0 350 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ARNTL2Q8WYA1 636 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 CPT1BQ92523 772 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 CRISPLD1Q9H336 500 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 ELL3Q9HB65 397 aaPredicted RBP16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 PLIN4Q96Q06 1357 aa16.76■□□□□ 0.27
CROCCP3-201ENST00000263511 OR2AG2A6NM03 316 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 SNPHO15079 494 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 DRD4P21917 467 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 SLC10A6Q3KNW5 377 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 C2orf73Q8N5S3 287 aaPredicted RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 CCDC177Q9NQR7 707 aaPredicted RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 EHD3Q9NZN3 535 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 NDRG2Q9UN36 371 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 FCF1Q9Y324 198 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 SRSF11Q05519 484 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 HGSNATQ68CP4 663 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 PRSS55Q6UWB4 352 aaPredicted RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 CFAP206Q8IYR0 622 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 CLHC1Q8NHS4 586 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 SLC9A7Q96T83 725 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 BCL2L14Q9BZR8 327 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 SDCBP2Q9H190 292 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 ELOVL2Q9NXB9 296 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 ZNF214Q9UL59 606 aaPredicted RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 CLDN4O14493 209 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 UGT2B17O75795 530 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 TFPIP10646 304 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 RPL17P18621 184 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 KLHL12Q53G59 568 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 ERICH5Q6P6B1 374 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 PEX5LQ8IYB4 626 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 CPSF7Q8N684 471 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 UBASH3BQ8TF42 649 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 NXNL1Q96CM4 212 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 RTKNQ9BST9 563 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 CDH3P22223 829 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 MPSTP25325 297 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 ZNF567Q8N184 647 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 FAM98AQ8NCA5 519 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 FZD8Q9H461 694 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 IPPKQ9H8X2 491 aa16.75■□□□□ 0.27
CROCCP3-201ENST00000263511 IGKV6D-41A0A0C4DH26 115 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 DDI2Q5TDH0 399 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 KBTBD8Q8NFY9 601 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 TSPAN14Q8NG11 270 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 FAM192AQ9GZU8 254 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 POLMQ9NP87 494 aaPredicted RBP16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 EQTNQ9NQ60 294 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 EGFL7Q9UHF1 273 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 CD84Q9UIB8 345 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 ACLYP53396 1101 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 TEAD4Q15561 434 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 SLC25A24Q6NUK1 477 aa16.74■□□□□ 0.27
CROCCP3-201ENST00000263511 MZT2BQ6NZ67 158 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms