RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 LRRC8EQ6NSJ5 796 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 CPLX4Q7Z7G2 160 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 NUDCD3Q8IVD9 361 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 IL17RCQ8NAC3 791 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 HEXDCQ8WVB3 486 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 ULK4Q96C45 1275 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 BOCQ9BWV1 1114 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 FGFR1OP2Q9NVK5 253 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 OAS3Q9Y6K5 1087 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 G3V2L1 256 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 SYNCRIPO60506 623 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 LTA4HP09960 611 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 SBK3P0C264 359 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 CCDC166P0CW27 439 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 ZNF37AP17032 561 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 ALDH3A1P30838 453 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 LIG3P49916 1009 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 CNTN1Q12860 1018 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 CSHL1Q14406 222 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 ITIH4Q14624 930 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 CST6Q15828 149 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 FAM83EQ2M2I3 478 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 TMEM52BQ4KMG9 183 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 HENMT1Q5T8I9 393 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 TRIM42Q8IWZ5 723 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 FSTL5Q8N475 847 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 SPATA6LQ8N4H0 392 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 RAB3IL1Q8TBN0 382 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 KCNJ9Q92806 393 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 RAB7BQ96AH8 199 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 MSANTD3Q96H12 275 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 COQ10AQ96MF6 247 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 SMOXQ9NWM0 555 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 TMPRSS11EQ9UL52 423 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 SHISA7A6NL88 538 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 TARM1B6A8C7 271 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 NIPSNAP2O75323 286 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 CPA3P15088 417 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 DRD3P35462 400 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 GLRBP48167 497 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 KPNA2P52292 529 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 PDAP1Q13442 181 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 PIP5KL1Q5T9C9 394 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 AGAP9Q5VTM2 703 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 PTCRAQ6ISU1 281 aaPredicted RBP22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 NRSN1Q8IZ57 195 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 TRAM1L1Q8N609 369 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 RDH11Q8TC12 318 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 SCAMP4Q969E2 229 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 WRAP53Q9BUR4 548 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 CLPBQ9H078 707 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 NSRP1Q9H0G5 558 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 SLC2A4RGQ9NR83 387 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 ZDHHC3Q9NYG2 299 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 MID2Q9UJV3 735 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 FAM50BQ9Y247 325 aa22.7■■□□□ 1.22
SMARCB1-201ENST00000263121 IGLV3-16A0A075B6K0 115 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 TK2O00142 265 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 RNASEH1O60930 286 aaKnown RBP22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 ADAM23O75077 832 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 VPS26AO75436 327 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 ADH1BP00325 375 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 NEFHP12036 1026 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 COPAP53621 1224 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 ACOX1Q15067 660 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 SDE2Q6IQ49 451 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 CYP2U1Q7Z449 544 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 AADATQ8N5Z0 425 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 OR2T3Q8NH03 318 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 SCYL1Q96KG9 808 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 GPR21Q99679 349 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 SPATA16Q9BXB7 569 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 SLCO1B3Q9NPD5 702 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 XPR1Q9UBH6 696 aa22.69■■□□□ 1.22
SMARCB1-201ENST00000263121 WNT9AO14904 365 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 MID1O15344 667 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 EDF1O60869 148 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 PYGLP06737 847 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 SRFP11831 508 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 C5AR1P21730 350 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 KCNA4P22459 653 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 MRPS21P82921 87 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 CREB5Q02930 508 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 CHI3L2Q15782 390 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 TECRLQ5HYJ1 363 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 ZNF776Q68DI1 518 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 KIAA1211LQ6NV74 962 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 FAM47EQ6ZV65 393 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 TRMT11Q7Z4G4 463 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 C10orf107Q8IVU9 208 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 DEFB123Q8N688 67 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 FAM136AQ96C01 138 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 DTD2Q96FN9 168 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 MRPL57Q9BQC6 102 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 ZSCAN5AQ9BUG6 496 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 RIOK2Q9BVS4 552 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 ABCG8Q9H221 673 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 MRPL46Q9H2W6 279 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 FBRSQ9HAH7 460 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 SYTL2Q9HCH5 934 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms