RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 SLC31A1O15431 190 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 IGLV3-19P01714 112 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 ZNF284Q2VY69 593 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 MAP7D1Q3KQU3 841 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 ARMC3Q5W041 872 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 TAS2R42Q7RTR8 314 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 HORMAD1Q86X24 394 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 SPNS2Q8IVW8 549 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 ATXN7L3BQ96GX2 97 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 PREBQ9HCU5 417 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 MBNL1Q9NR56 388 aaKnown RBP27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 FBXO6Q9NRD1 293 aaPredicted RBP27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 WSB2Q9NYS7 404 aaPredicted RBP27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 C15orf41Q9Y2V0 281 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 SLC30A1Q9Y6M5 507 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 PLXNA2O75051 1894 aa27.3■■□□□ 1.96
SMARCD3-201ENST00000262188 RAD51BO15315 384 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 RPS21P63220 83 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 ZNF844Q08AG5 666 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 HENMT1Q5T8I9 393 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 MAML2Q8IZL2 1156 aaPredicted RBP27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 OR2T34Q8NGX1 318 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 RUFY1Q96T51 708 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 PAFAH2Q99487 392 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 EML5Q05BV3 1969 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 TLDC2A0PJX2 215 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 FOXO6A8MYZ6 492 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 AXIN1O15169 862 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 GABRB3P28472 473 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 CD6P30203 668 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 FNTBP49356 437 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 NFATC2Q13469 925 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 FRG1Q14331 258 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 FASTKD1Q53R41 847 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 ZNF398Q8TD17 642 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 FUBP1Q96AE4 644 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 PLEKHG4BQ96PX9 1271 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 SGK2Q9HBY8 427 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 MBD1Q9UIS9 605 aaPredicted RBP27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 CA5BQ9Y2D0 317 aa27.29■■□□□ 1.96
SMARCD3-201ENST00000262188 PCCBP05166 539 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 SFSWAPQ12872 951 aaKnown RBP27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 WSCD2Q2TBF2 565 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 ZNF648Q5T619 568 aaPredicted RBP27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 IER2Q9BTL4 223 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 SLC17A9Q9BYT1 436 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 TBK1Q9UHD2 729 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 SOD1P00441 154 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 STAT4Q14765 748 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 KIAA1161Q6NSJ0 714 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 CYS1Q717R9 158 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 STRA8Q7Z7C7 330 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 CILP2Q8IUL8 1156 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 C1QTNF2Q9BXJ5 285 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 APPL1Q9UKG1 709 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 FBXO5Q9UKT4 447 aa27.28■■□□□ 1.96
SMARCD3-201ENST00000262188 LRRC72A6NJI9 287 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 INPP4BO15327 924 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 LAMTOR5O43504 91 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 ZNF217O75362 1048 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 PEX19P40855 299 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 CREB5Q02930 508 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 CACNG1Q06432 222 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 SPATA21Q7Z572 469 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 LRRC6Q86X45 466 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 C1orf210Q8IVY1 113 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 FBXL6Q8N531 539 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 CCT8L2Q96SF2 557 aa27.27■■□□□ 1.96
SMARCD3-201ENST00000262188 OR1I1O60431 355 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 MTX2O75431 263 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 HAUS5O94927 633 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 AHSGP02765 367 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 BCKDHBP21953 392 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 DCDC1P59894 354 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 CSTF1Q05048 431 aaKnown RBP27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 SGCGQ13326 291 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 KLHL38Q2WGJ6 581 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 RAET1GQ6H3X3 334 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 MAMSTRQ6ZN01 415 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 MARK2Q7KZI7 788 aaKnown RBP27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 CYP2U1Q7Z449 544 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 SNX20Q7Z614 316 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 SERPINA9Q86WD7 417 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 CNTN4Q8IWV2 1026 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 NRSN1Q8IZ57 195 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 DCAKDQ8WVC6 231 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 CDKL2Q92772 493 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 FAM167BQ9BTA0 163 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 BOCQ9BWV1 1114 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 PRMT8Q9NR22 394 aaPredicted RBP27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 PLXNB3Q9ULL4 1909 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 TDGF1P13385 188 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 ITGALP20701 1170 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 PGGT1BP53609 377 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 SRSF5Q13243 272 aaKnown RBP27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 IRF4Q15306 451 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 SETMARQ53H47 684 aaPredicted RBP27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 CNSTQ6PJW8 725 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 DTWD2Q8NBA8 298 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 C2CD4AQ8NCU7 369 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms