RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ADH1BP00325 375 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 APOA4P06727 396 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 PKMP14618 531 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 ZNF7P17097 686 aaPredicted RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 C5AR1P21730 350 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 RPS3P23396 243 aaKnown RBP eCLIP9.38□□□□□ -0.91
NIP7-202ENST00000254941 CA5AP35218 305 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 DRD3P35462 400 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ETV3P41162 512 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 LIG3P49916 1009 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 MRPS21P82921 87 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 CREB5Q02930 508 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 CNTN1Q12860 1018 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 DLG1Q12959 904 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 TDGQ13569 410 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 FAM83EQ2M2I3 478 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 PUS10Q3MIT2 529 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 CTSL3PQ5NE16 218 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 TMEM207Q6UWW9 146 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 TRMT11Q7Z4G4 463 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 PIM3Q86V86 326 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 NRSN1Q8IZ57 195 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 TMEM151AQ8N4L1 468 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 BCAS4Q8TDM0 211 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 KCTD4Q8WVF5 259 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ZNF75CPQ92670 426 aaPredicted RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 KCNJ9Q92806 393 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ULK4Q96C45 1275 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 NXNL1Q96CM4 212 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 COQ10AQ96MF6 247 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 TSNARE1Q96NA8 513 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 CCT8L2Q96SF2 557 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 FAM83DQ9H4H8 585 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 MANSC1Q9H8J5 431 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 FBRSQ9HAH7 460 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 SMOXQ9NWM0 555 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 SIRPGQ9P1W8 387 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 COPG2Q9UBF2 871 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 CD84Q9UIB8 345 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 CRLS1Q9UJA2 301 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 RUVBL2Q9Y230 463 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 FAM50BQ9Y247 325 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 IGLV3-16A0A075B6K0 115 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 LOC730098B7Z3J9 87 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 PLK4O00444 970 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 KLF11O14901 512 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 MID1O15344 667 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 BPGMP07738 259 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 VIMP08670 466 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 LTA4HP09960 611 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 CCDC166P0CW27 439 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ZNF37AP17032 561 aaPredicted RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 GM2AP17900 193 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 SKIV2L2P42285 1042 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 COPAP53621 1224 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 IRX4P78413 519 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 PDAP1Q13442 181 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 CCINQ13939 588 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ITIH4Q14624 930 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 STARD3Q14849 445 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 PCLAFQ15004 111 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ACOX1Q15067 660 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 FBXO43Q4G163 708 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 TMEM52BQ4KMG9 183 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 SETMARQ53H47 684 aaPredicted RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 PIP5KL1Q5T9C9 394 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 AGAP9Q5VTM2 703 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 KIAA1211LQ6NV74 962 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 CYP2U1Q7Z449 544 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 LRRC34Q8IZ02 419 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 FSTL5Q8N475 847 aaPredicted RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 AADATQ8N5Z0 425 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 CCDC63Q8NA47 563 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 TXNDC5Q8NBS9 432 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 OR2T3Q8NH03 318 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ANKRD49Q8WVL7 239 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 SCAMP4Q969E2 229 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ERLEC1Q96DZ1 483 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 DTD2Q96FN9 168 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ZSCAN5AQ9BUG6 496 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 WRAP53Q9BUR4 548 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 MECRQ9BV79 373 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 BOCQ9BWV1 1114 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 SPATA16Q9BXB7 569 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 MKRN2Q9H000 416 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 CLPBQ9H078 707 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 CD248Q9HCU0 757 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 IGSF5Q9NSI5 407 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 FADS3Q9Y5Q0 445 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 OAS3Q9Y6K5 1087 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 VCANP13611 3396 aa9.37□□□□□ -0.91
NIP7-202ENST00000254941 A0A1W2PQF6 199 aa9.37□□□□□ -0.91
NIP7-202ENST00000254941 TARM1B6A8C7 271 aa9.37□□□□□ -0.91
NIP7-202ENST00000254941 NEMP1O14524 444 aa9.37□□□□□ -0.91
NIP7-202ENST00000254941 WNT9AO14904 365 aa9.37□□□□□ -0.91
NIP7-202ENST00000254941 AP1G1O43747 822 aa9.37□□□□□ -0.91
NIP7-202ENST00000254941 NIPSNAP2O75323 286 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms