RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SDR39U1Q9NRG7 319 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-201ENST00000248139 NDUFA13Q9P0J0 144 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 FAM92AA1XBS5 289 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 RPL17P18621 184 aaKnown RBP25.38■■□□□ 1.65
RAB40C-201ENST00000248139 TXNL4AP83876 142 aaKnown RBP25.38■■□□□ 1.65
RAB40C-201ENST00000248139 ANKS6Q68DC2 871 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 ERMP1Q7Z2K6 904 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 PLXNA3P51805 1871 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 INPP4BO15327 924 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 SLC5A2P31639 672 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 RBBP7Q16576 425 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 TYSND1Q2T9J0 566 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 NHSL2Q5HYW2 709 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 CMTR2Q8IYT2 770 aaKnown RBP25.37■■□□□ 1.65
RAB40C-201ENST00000248139 BIRC8Q96P09 236 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 UHRF1Q96T88 793 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-201ENST00000248139 SOX17Q9H6I2 414 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-201ENST00000248139 SLC52A3Q9NQ40 469 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 NLE1Q9NVX2 485 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-201ENST00000248139 EIF2B4Q9UI10 523 aaKnown RBP25.37■■□□□ 1.65
RAB40C-201ENST00000248139 GPR45Q9Y5Y3 372 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 ARPC2O15144 300 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 ADAM12O43184 909 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 NFYCQ13952 458 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 BLOC1S3Q6QNY0 202 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 HGH1Q9BTY7 390 aa25.37■■□□□ 1.65
RAB40C-201ENST00000248139 DLGAP1O14490 977 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 H6PDO95479 791 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 IRF1P10914 325 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 OGNP20774 298 aaKnown RBP25.36■■□□□ 1.65
RAB40C-201ENST00000248139 RAD51Q06609 339 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 MAP7Q14244 749 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 ZRANB3Q5FWF4 1079 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 TRAF7Q6Q0C0 670 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 CPNE9Q8IYJ1 553 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 CDYL2Q8N8U2 506 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 OR52B6Q8NGF0 335 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 NMRK2Q9NPI5 230 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 CCM2LQ9NUG4 571 aaPredicted RBP25.36■■□□□ 1.65
RAB40C-201ENST00000248139 SMOXQ9NWM0 555 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 ABCD2Q9UBJ2 740 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 CEPT1Q9Y6K0 416 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 EOMESO95936 686 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 ATF6P18850 670 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 MAGEA11P43364 429 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 MAPKAPK2P49137 400 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 NR1H2P55055 460 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 TNK2Q07912 1038 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 TIGD2Q4W5G0 525 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 RGMBQ6NW40 437 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 MGME1Q9BQP7 344 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 MRGBPQ9NV56 204 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 INTS7Q9NVH2 962 aaKnown RBP25.36■■□□□ 1.65
RAB40C-201ENST00000248139 PTTG2Q9NZH5 202 aa25.36■■□□□ 1.65
RAB40C-201ENST00000248139 UBA2Q9UBT2 640 aaPredicted RBP25.36■■□□□ 1.65
RAB40C-201ENST00000248139 OR4F21O95013 312 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 EPOP01588 193 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 SAPCD2Q86UD0 394 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 TCF12Q99081 682 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 HOPXQ9BPY8 73 aaPredicted RBP25.35■■□□□ 1.65
RAB40C-201ENST00000248139 DERL2Q9GZP9 239 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 MUC3BQ9H195 1237 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 SYTL2Q9HCH5 934 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 OLA1Q9NTK5 396 aaKnown RBP25.35■■□□□ 1.65
RAB40C-201ENST00000248139 PLK2Q9NYY3 685 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 OAZ3Q9UMX2 235 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 CYBBP04839 570 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 MC4RP32245 332 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 CYP51A1Q16850 503 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 USP41Q3LFD5 358 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 WBP2Q969T9 261 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 DMTF1Q9Y222 760 aa25.35■■□□□ 1.65
RAB40C-201ENST00000248139 LCHNA4D1U4 455 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 H3BNH8 94 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 INSIG1O15503 277 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 KLKB1P03952 638 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 ASLP04424 464 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 PPP4R4Q6NUP7 873 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 FIBCD1Q8N539 461 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 MINDY1Q8N5J2 469 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 RIN3Q8TB24 985 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 BHMTQ93088 406 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 LINGO1Q96FE5 620 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 DUS3LQ96G46 650 aaKnown RBP25.34■■□□□ 1.65
RAB40C-201ENST00000248139 SCUBE2Q9NQ36 999 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 ARMC1Q9NVT9 282 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 SEPT3Q9UH03 358 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 RNF103-CHMP3A0A140T963 221 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 BBIP1A8MTZ0 92 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 INPPL1O15357 1258 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 ACSL4O60488 711 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 PRAMEF12O95522 483 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 PAX3P23760 479 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 IL12AP29459 219 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 ZFP36L2P47974 494 aaKnown RBP25.34■■□□□ 1.65
RAB40C-201ENST00000248139 GSK3BP49841 420 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 OXCT1P55809 520 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 FCGRTP55899 365 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 FAM26DQ5JW98 314 aa25.34■■□□□ 1.65
RAB40C-201ENST00000248139 CTSL3PQ5NE16 218 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms