RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RPP25Q9BUL9 199 aaKnown RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 MTG2Q9H4K7 406 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 DYRK4Q9NR20 520 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 LATS2Q9NRM7 1088 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 CPSF2Q9P2I0 782 aaKnown RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 KLHL42Q9P2K6 505 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 TRMT6Q9UJA5 497 aaKnown RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 FNDC3AQ9Y2H6 1198 aaKnown RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 LRRK1Q38SD2 2015 aa14.08□□□□□ -0.15
SDF2-201ENST00000247020 OR1I1O60431 355 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 BMP1P13497 986 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 HLA-EP13747 358 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 ABCE1P61221 599 aaKnown RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 SMAD4Q13485 552 aaKnown RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 SETMARQ53H47 684 aaPredicted RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 CYP2U1Q7Z449 544 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 PIM3Q86V86 326 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 GBP7Q8N8V2 638 aaPredicted RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 ST13P5Q8NFI4 369 aaPredicted RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 CD200R1Q8TD46 325 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 DNASE1L2Q92874 299 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 PDLIM5Q96HC4 596 aaKnown RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 GPR21Q99679 349 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 ZSCAN5AQ9BUG6 496 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 HDAC8Q9BY41 377 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 FAM83DQ9H4H8 585 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 STN1Q9H668 368 aaKnown RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 C8orf33Q9H7E9 229 aaPredicted RBP14.08□□□□□ -0.16
SDF2-201ENST00000247020 FBRSQ9HAH7 460 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 PRSS16Q9NQE7 514 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 SARDHQ9UL12 918 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 TMCO1Q9UM00 188 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 DHRS7Q9Y394 339 aa14.08□□□□□ -0.16
SDF2-201ENST00000247020 CDH23Q9H251 3354 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 PIKFYVEQ9Y2I7 2098 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 LAMA3Q16787 3333 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 A8MX80 341 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 DLX3O60479 287 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 NPHS1O60500 1241 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 DNAJC6O75061 913 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 DCTN3O75935 186 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 EPHX1P07099 455 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 ELFN1P0C7U0 828 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 TFEBP19484 476 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 IGFBP4P22692 258 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 PGGT1BP53609 377 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 NAA20P61599 178 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 CCDC15Q0P6D6 951 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 CAMK2GQ13555 558 aaPredicted RBP14.07□□□□□ -0.16
SDF2-201ENST00000247020 HENMT1Q5T8I9 393 aaKnown RBP14.07□□□□□ -0.16
SDF2-201ENST00000247020 EGFLAMQ63HQ2 1017 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 PTRHD1Q6GMV3 140 aaKnown RBP14.07□□□□□ -0.16
SDF2-201ENST00000247020 LIPIQ6XZB0 460 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 ZCCHC23Q6ZST2 131 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 ZNF765Q7L2R6 523 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 PIWIL4Q7Z3Z4 852 aaKnown RBP14.07□□□□□ -0.16
SDF2-201ENST00000247020 TECPR1Q7Z6L1 1165 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 ISCA2Q86U28 154 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 WDR75Q8IWA0 830 aaKnown RBP14.07□□□□□ -0.16
SDF2-201ENST00000247020 KIRREL3Q8IZU9 778 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 PIWIL2Q8TC59 973 aaKnown RBP14.07□□□□□ -0.16
SDF2-201ENST00000247020 KIAA1191Q96A73 305 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 ARRDC3Q96B67 414 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 VPS35Q96QK1 796 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 COPS8Q99627 209 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 DRC3Q9H069 523 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 KCTD5Q9NXV2 234 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 KCNK4Q9NYG8 393 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 HCN2Q9UL51 889 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 FAM50BQ9Y247 325 aa14.07□□□□□ -0.16
SDF2-201ENST00000247020 CCT8L1PA6NM43 557 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 EIF3FO00303 357 aaPredicted RBP14.06□□□□□ -0.16
SDF2-201ENST00000247020 QSOX1O00391 747 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 AREL1O15033 823 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 NIPSNAP2O75323 286 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 KIAA0754O94854 1291 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 ADRB3P13945 408 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 CHRM3P20309 590 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 GALK1P51570 392 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 CLCN7P51798 805 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 HNRNPH2P55795 449 aaKnown RBP14.06□□□□□ -0.16
SDF2-201ENST00000247020 IL2P60568 153 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 CREB5Q02930 508 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 GALNT1Q10472 559 aaPredicted RBP14.06□□□□□ -0.16
SDF2-201ENST00000247020 IFT88Q13099 833 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 RCN2Q14257 317 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 TMEM52BQ4KMG9 183 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 ATP13A5Q4VNC0 1218 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 CES4AQ5XG92 561 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 NAIF1Q69YI7 327 aaPredicted RBP14.06□□□□□ -0.16
SDF2-201ENST00000247020 FBXL19Q6PCT2 694 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 PAQR3Q6TCH7 311 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 ERN2Q76MJ5 926 aaKnown RBP14.06□□□□□ -0.16
SDF2-201ENST00000247020 TRPM8Q7Z2W7 1104 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 HSD11B1LQ7Z5J1 315 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 NLRP8Q86W28 1048 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 RALGPS2Q86X27 583 aaPredicted RBP14.06□□□□□ -0.16
SDF2-201ENST00000247020 SFTPA1Q8IWL2 248 aa14.06□□□□□ -0.16
SDF2-201ENST00000247020 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms