RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 FRMD8P1Q9BZ68 369 aaPredicted RBP16.04■□□□□ 0.16
CLPP-201ENST00000245816 SEMA4CQ9C0C4 833 aa16.04■□□□□ 0.16
CLPP-201ENST00000245816 SEMA6CQ9H3T2 930 aa16.04■□□□□ 0.16
CLPP-201ENST00000245816 EPB41L5Q9HCM4 733 aa16.04■□□□□ 0.16
CLPP-201ENST00000245816 PHPT1Q9NRX4 125 aaPredicted RBP16.04■□□□□ 0.16
CLPP-201ENST00000245816 RAD18Q9NS91 495 aa16.04■□□□□ 0.16
CLPP-201ENST00000245816 TAAR2Q9P1P5 351 aa16.04■□□□□ 0.16
CLPP-201ENST00000245816 KLHL8Q9P2G9 620 aaPredicted RBP16.04■□□□□ 0.16
CLPP-201ENST00000245816 ZNF462Q96JM2 2506 aa16.04■□□□□ 0.16
CLPP-201ENST00000245816 USP27XA6NNY8 438 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 PPM1DO15297 605 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 KIF5CO60282 957 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 STK10O94804 968 aaKnown RBP16.03■□□□□ 0.16
CLPP-201ENST00000245816 ECEL1O95672 775 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 RBP3P10745 1247 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 ITIH1P19827 911 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 CCKBRP32239 447 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 TNNT3P45378 269 aaPredicted RBP16.03■□□□□ 0.16
CLPP-201ENST00000245816 GNPDA1P46926 289 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 ARSDP51689 593 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 EIF3EP60228 445 aaKnown RBP16.03■□□□□ 0.16
CLPP-201ENST00000245816 ARHGAP40Q5TG30 622 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 ITPRIPL1Q6GPH6 555 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 RAET1GQ6H3X3 334 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 ADAMTSL4Q6UY14 1074 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 ZNF438Q7Z4V0 828 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 ARL14Q8N4G2 192 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 SNRNP27Q8WVK2 155 aaKnown RBP16.03■□□□□ 0.16
CLPP-201ENST00000245816 KCNE4Q8WWG9 221 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 SCG3Q8WXD2 468 aaKnown RBP16.03■□□□□ 0.16
CLPP-201ENST00000245816 SLC39A7Q92504 469 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 HERPUD2Q9BSE4 406 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 CEP41Q9BYV8 373 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 DPEP2Q9H4A9 486 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 TRABDQ9H4I3 376 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 THSD1Q9NS62 852 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 PKD2L2Q9NZM6 624 aa16.03■□□□□ 0.16
CLPP-201ENST00000245816 NFKBIL1Q9UBC1 381 aaPredicted RBP16.03■□□□□ 0.16
CLPP-201ENST00000245816 PIEZO2Q9H5I5 2752 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 C1orf232A0A0U1RR37 186 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 FADS2P1A8MWK0 482 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 ANXA9O76027 345 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 MT-CYBP00156 380 aaPredicted RBP16.02■□□□□ 0.16
CLPP-201ENST00000245816 IVLP07476 585 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 PNLIPP16233 465 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 RBL1P28749 1068 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 SLC5A2P31639 672 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 SPINT3P49223 89 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 INHBCP55103 352 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 NR1D2Q14995 579 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 C16orf72Q14CZ0 275 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 ZNF569Q5MCW4 686 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 MEI1Q5TIA1 1274 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 DOK6Q6PKX4 331 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 KDELC1Q6UW63 502 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 RAB11FIP2Q7L804 512 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 TMC3Q7Z5M5 1100 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 C17orf53Q8N3J3 647 aaPredicted RBP16.02■□□□□ 0.16
CLPP-201ENST00000245816 TRIM58Q8NG06 486 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 SPATA22Q8NHS9 363 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 WDR48Q8TAF3 677 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 ZDHHC1Q8WTX9 485 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 TTC9Q92623 222 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 PMEPA1Q969W9 287 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 AP2M1Q96CW1 435 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 RIOK2Q9BVS4 552 aaKnown RBP16.02■□□□□ 0.16
CLPP-201ENST00000245816 CARD9Q9H257 536 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 ZFYVE1Q9HBF4 777 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 RDH14Q9HBH5 336 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 TRNAU1APQ9NX07 287 aaKnown RBP16.02■□□□□ 0.16
CLPP-201ENST00000245816 ZKSCAN5Q9Y2L8 839 aa16.02■□□□□ 0.16
CLPP-201ENST00000245816 AAR2Q9Y312 384 aaKnown RBP16.02■□□□□ 0.16
CLPP-201ENST00000245816 C5orf60A6NFR6 353 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 PLD2O14939 933 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 NUDT21O43809 227 aaKnown RBP16.01■□□□□ 0.15
CLPP-201ENST00000245816 DNAJC6O75061 913 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 ITGA2BP08514 1039 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 WT1P19544 449 aaPredicted RBP16.01■□□□□ 0.15
CLPP-201ENST00000245816 NFKB1P19838 968 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 HLA-DPA1P20036 260 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 MSNP26038 577 aaKnown RBP16.01■□□□□ 0.15
CLPP-201ENST00000245816 CD1CP29017 333 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 RBMS1P29558 406 aaKnown RBP16.01■□□□□ 0.15
CLPP-201ENST00000245816 DEKP35659 375 aaKnown RBP16.01■□□□□ 0.15
CLPP-201ENST00000245816 GEMP55040 296 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 WNT3AP56704 352 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 DCDC1P59894 354 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 PYCR3Q53H96 274 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 ZDHHC20Q5W0Z9 365 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 DARS2Q6PI48 645 aaKnown RBP16.01■□□□□ 0.15
CLPP-201ENST00000245816 SLC30A9Q6PML9 568 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 USP53Q70EK8 1073 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 FBXO39Q8N4B4 442 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 DTX3LQ8TDB6 740 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 NUDT22Q9BRQ3 303 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 DPH1Q9BZG8 443 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 GBA3Q9H227 469 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 HACD3Q9P035 362 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 FOXJ2Q9P0K8 574 aa16.01■□□□□ 0.15
CLPP-201ENST00000245816 TMEM9Q9P0T7 183 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms