RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 ERVMER34-1Q9H9K5 563 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 SCPEP1Q9HB40 452 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 GPN1Q9HCN4 374 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-201ENST00000236192 TM9SF3Q9HD45 589 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 VPS9D1Q9Y2B5 631 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 C5orf58C9J3I9 102 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CASKO14936 926 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 SNX4O95219 450 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 PRKCAP17252 672 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 DDOSTP39656 456 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 DGKQP52824 942 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 MS4A2Q01362 244 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 SLC9A5Q14940 896 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 MSS51Q4VC12 460 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 TAF8Q7Z7C8 310 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 ZZZ3Q8IYH5 903 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 OR13F1Q8NGS4 319 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 UBA3Q8TBC4 463 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 SPPL2AQ8TCT8 520 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 KREMEN1Q96MU8 473 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 RNF157Q96PX1 679 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 KANSL3Q9P2N6 904 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 MFHAS1Q9Y4C4 1052 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 H3BM21 787 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 PLOD2O00469 737 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 ECDO95905 644 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CSF2P04141 144 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CHRNGP07510 517 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 BMP4P12644 408 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 GDF10P55107 478 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 POU6F1Q14863 301 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 LRIT3Q3SXY7 679 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 MON1BQ7L1V2 547 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CPB2Q96IY4 423 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 MRPL4Q9BYD3 311 aaKnown RBP12.81□□□□□ -0.36
VAMP4-201ENST00000236192 PDP1Q9P0J1 537 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-201ENST00000236192 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 MEIOCA2RUB1 952 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 H7C0S8 307 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SGCEO43556 437 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 RFPL3O75679 317 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 APOC3P02656 99 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 LCP1P13796 627 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SLC2A4P14672 509 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 EEFSECP57772 596 aaKnown RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CCNA1P78396 465 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SIX1Q15475 284 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 NPY5RQ15761 445 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SLC36A3Q495N2 470 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 FAM205BPQ63HN1 556 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF438Q7Z4V0 828 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 TMEM17Q86X19 198 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 EPHX4Q8IUS5 362 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 VGLL2Q8N8G2 317 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ANKLE1Q8NAG6 615 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SLC38A4Q969I6 547 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 AP2M1Q96CW1 435 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 RBM38Q9H0Z9 239 aaKnown RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 PDGFCQ9NRA1 345 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 OXSMQ9NWU1 459 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 FNDC3AQ9Y2H6 1198 aaKnown RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF536O15090 1300 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 C7orf72A4D263 438 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 E9PAM4 449 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 FOSL2P15408 326 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CBX5P45973 191 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 NCS1P62166 190 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 RACK1P63244 317 aaKnown RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 POU6F2P78424 691 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CYP4F8P98187 520 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 PIGFQ07326 219 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 FOXM1Q08050 763 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 FGL2Q14314 439 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 EML3Q32P44 896 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF613Q6PF04 617 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 VWA5B2Q8N398 1253 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ZSWIM3Q96MP5 696 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 RIT2Q99578 217 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CLPBQ9H078 707 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SYTL2Q9HCH5 934 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CLCA2Q9UQC9 943 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 RNF11Q9Y3C5 154 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CXorf49A8MYA2 514 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SLITRK3O94933 977 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 TGM6O95932 706 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 MAPK1P28482 360 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ETV4P43268 484 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 TPMTP51580 245 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CDC20Q12834 499 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 TEX44Q53QW1 395 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 SOX17Q9H6I2 414 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 TMEM181Q9P2C4 612 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 NPR2P20594 1047 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 LIMK2P53671 638 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms