RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SPATC1LQ9H0A9 340 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 ERAP1Q9NZ08 941 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 ZFC3H1O60293 1989 aaKnown RBP14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 COL11A1P12107 1806 aaPredicted RBP14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 HOXC11O43248 304 aaPredicted RBP14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 RECQL4O94761 1208 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 CCNA1P78396 465 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 CBLBQ13191 982 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 PAFAH1B3Q15102 231 aaKnown RBP14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 SLC36A3Q495N2 470 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 NEK10Q6ZWH5 1172 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 ANKK1Q8NFD2 765 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 OSMRQ99650 979 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 C12orf4Q9NQ89 552 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 RAD54BQ9Y620 910 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 PMF1-BGLAPU3KQ54 211 aa14.09□□□□□ -0.15
PCDHB3-201ENST00000231130 CENPBD1B2RD01 187 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 NPHS1O60500 1241 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 ABCB1P08183 1280 aaPredicted RBP14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 TGFB3P10600 412 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 MBL2P11226 248 aaPredicted RBP14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 BMP4P12644 408 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 ACADSBP45954 432 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 VBP1P61758 197 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 KCTD11Q693B1 232 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 SPATC1Q76KD6 591 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 SCML4Q8N228 414 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 CADM2Q8N3J6 435 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 ATL1Q8WXF7 558 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 KCTD14Q9BQ13 255 aaPredicted RBP14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 RNF39Q9H2S5 420 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 SEMA4BQ9NPR2 832 aaPredicted RBP14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 ZNF221Q9UK13 617 aa14.08□□□□□ -0.15
PCDHB3-201ENST00000231130 ERI2A8K979 691 aaKnown RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 CENPXA8MT69 81 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 TTC34A8MYJ7 566 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 DYRK3O43781 588 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 GFAPP14136 432 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 FMO4P31512 558 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 HLCSP50747 726 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 DGUOKQ16854 277 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 C9orf57Q5W0N0 161 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 PLD3Q8IV08 490 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 ANKRD13AQ8IZ07 590 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 PABPC5Q96DU9 382 aaKnown RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 BBS2Q9BXC9 721 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 ZNF717Q9BY31 904 aaPredicted RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 TRIM15Q9C019 465 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 C6orf62Q9GZU0 229 aaPredicted RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 ADAMTS5Q9UNA0 930 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 C19orf81C9J6K1 198 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 M0QX08 132 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 NOBOXO60393 691 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 LDLRP01130 860 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 IFI30P13284 250 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 ARNTP27540 789 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 PTPRCAPQ14761 206 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 R3HCC1LQ7Z5L2 792 aaKnown RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 DCP2Q8IU60 420 aaKnown RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 GALNT13Q8IUC8 556 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 PTGR2Q8N8N7 351 aaPredicted RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 B3GALNT2Q8NCR0 500 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 AFG1LQ8WV93 481 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 ZNF641Q96N77 438 aaPredicted RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 CAMKK2Q96RR4 588 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 NPY6RQ99463 290 aa14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 RPRD1BQ9NQG5 326 aaKnown RBP14.08□□□□□ -0.16
PCDHB3-201ENST00000231130 TBKBP1A7MCY6 615 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 CAPNS1P04632 268 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 GTF2E2P29084 291 aaKnown RBP14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 PYCR3Q53H96 274 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 WSCD1Q658N2 575 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 HS3ST5Q8IZT8 346 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 TTC30BQ8N4P2 665 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 MED30Q96HR3 178 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 ZNF560Q96MR9 790 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 CCDC177Q9NQR7 707 aaPredicted RBP14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 AGPAT4Q9NRZ5 378 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 RBM22Q9NW64 420 aaKnown RBP eCLIP14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 COL4A5P29400 1685 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 TRIM16O95361 564 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 LTA4HP09960 611 aaKnown RBP14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 PIRTP0C851 137 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 UBL4AP11441 157 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 HADHAP40939 763 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 GSK3BP49841 420 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 SH3BP2P78314 561 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 LIPEQ05469 1076 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 LAPTM5Q13571 262 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 ZFP69Q49AA0 526 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 CYBRD1Q53TN4 286 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 ANKRD34AQ69YU3 496 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 PLPPR4Q7Z2D5 763 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 GPRIN1Q7Z2K8 1008 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 BNIPLQ7Z465 357 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 OSTM1Q86WC4 334 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 MIER2Q8N344 545 aa14.07□□□□□ -0.16
PCDHB3-201ENST00000231130 ATPAF2Q8N5M1 289 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms