RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ROBO3Q96MS0 1386 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 ITGB5P18084 799 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CORO1AP31146 461 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 FAUP35544 74 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 TMPRSS11AQ6ZMR5 421 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SLCO6A1Q86UG4 719 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CLPTM1LQ96KA5 538 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 APOLD1Q96LR9 279 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 KREMEN1Q96MU8 473 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 RPL26L1Q9UNX3 145 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 WBP11Q9Y2W2 641 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SMIM35A0A1B0GVV1 85 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 E9PAM4 449 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 MFSD11O43934 449 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 ACADLP28330 430 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 AKT2P31751 481 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 OLR1P78380 273 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SMARCB1Q12824 385 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 TAF10Q12962 218 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SUZ12Q15022 739 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 RNASE12Q5GAN4 147 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 RTL4Q6ZR62 310 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 C15orf52Q6ZUT6 534 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SLC44A1Q8WWI5 657 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 DNAJC28Q9NX36 388 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CKLFQ9UBR5 152 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 RAI2Q9Y5P3 530 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 H3BM21 787 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PRODHO43272 600 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 NADKO95544 446 aaPredicted RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CACNG1Q06432 222 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 C5orf22Q49AR2 442 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 GCNT6Q5T4J0 391 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 GLYATQ6IB77 296 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 POMZP3Q6PJE2 187 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PQLC1Q8N2U9 271 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CERS5Q8N5B7 392 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 TWIST2Q8WVJ9 160 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 KBTBD7Q8WVZ9 684 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CNOT6Q9ULM6 557 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 ARHGEF33A8MVX0 844 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 APODP05090 189 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PCCBP05166 539 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PKMP14618 531 aaKnown RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 HOXA10P31260 410 aaPredicted RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SPAM1P38567 509 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PTPN9P43378 593 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 TUSC3Q13454 348 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SLC5A9Q2M3M2 681 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 ERICH5Q6P6B1 374 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 RALGPS2Q86X27 583 aaPredicted RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PEX5LQ8IYB4 626 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 FAM47BQ8NA70 645 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 C1GALT1C1Q96EU7 318 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 S100A14Q9HCY8 104 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CHST10O43529 356 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 MMP3P08254 477 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PSMD8P48556 350 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 C4orf32Q8N8J7 132 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 SPPL2BQ8TCT7 592 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 CLCC1Q96S66 551 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 GBA3Q9H227 469 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 GOLGA2P5Q9HBQ8 144 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 ZNF304Q9HCX3 659 aa11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PHPT1Q9NRX4 125 aaPredicted RBP11.49□□□□□ -0.57
LAMA4-201ENST00000230538 PRMT5O14744 637 aaPredicted RBP11.48□□□□□ -0.57
LAMA4-201ENST00000230538 CCL16O15467 120 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 FABP3P05413 133 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 SAGP10523 405 aaPredicted RBP11.48□□□□□ -0.57
LAMA4-201ENST00000230538 COL6A2P12110 1019 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 IGFBP5P24593 272 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 PBX1P40424 430 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 GLUD2P49448 558 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 KLF10Q13118 480 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 RFTN2Q52LD8 501 aaPredicted RBP11.48□□□□□ -0.57
LAMA4-201ENST00000230538 PGBD2Q6P3X8 592 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 NXNL1Q96CM4 212 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 C12orf65Q9H3J6 166 aaKnown RBP11.48□□□□□ -0.57
LAMA4-201ENST00000230538 CLEC4AQ9UMR7 237 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 R3HDM2Q9Y2K5 976 aaKnown RBP11.48□□□□□ -0.57
LAMA4-201ENST00000230538 EME2A4GXA9 379 aaPredicted RBP11.48□□□□□ -0.57
LAMA4-201ENST00000230538 C1RP00736 705 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 C2P06681 752 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 IL18Q14116 193 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 KCNA10Q16322 511 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 C6orf52Q5T4I8 152 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 SLC26A9Q7LBE3 791 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 ATCAYQ86WG3 371 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.48□□□□□ -0.57
LAMA4-201ENST00000230538 PIGKQ92643 395 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 XKRYO14609 159 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 C22orf31O95567 290 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 LYNP07948 512 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 MNDAP41218 407 aa11.48□□□□□ -0.57
LAMA4-201ENST00000230538 ASMTP46597 345 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms