RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PLEKHA1Q9HB21 404 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 FBXO5Q9UKT4 447 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SLC31A1O15431 190 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 RSL1D1O76021 490 aaKnown RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SEC24AO95486 1093 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ACRP10323 421 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 CHN2P52757 468 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 TAS2R40P59535 323 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 GCNT6Q5T4J0 391 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 NT5DC1Q5TFE4 455 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SPATA19Q7Z5L4 167 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 LCN9Q8WX39 176 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 HAS1Q92839 578 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 FAM163AQ96GL9 167 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 CCDC177Q9NQR7 707 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SERPINA1P01009 418 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 IFNA6P05013 189 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 TCF4P15884 667 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 CYP4F8P98187 520 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SPDYCQ5MJ68 293 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 CHST15Q7LFX5 561 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 P2RY11Q96G91 374 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SIN3BO75182 1162 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 GABRB2P47870 512 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ZBTB6Q15916 424 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 FUT10Q6P4F1 479 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ULK3Q6PHR2 472 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SLC34A3Q8N130 599 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 KBTBD8Q8NFY9 601 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SUN3Q8TAQ9 357 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 STK32AQ8WU08 396 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 COX4I2Q96KJ9 171 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 IRGMA1A4Y4 181 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 PGRMC2O15173 223 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 TRIM3O75382 744 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ILF3Q12906 894 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 NAE1Q13564 534 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ZCCHC12Q6PEW1 402 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 NPAS4Q8IUM7 802 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 APOLD1Q96LR9 279 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 TSSK3Q96PN8 268 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ZNF184Q99676 751 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 GPR20Q99678 358 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 LRTM1Q9HBL6 345 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 TRPS1Q9UHF7 1281 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 PRKAR1AP10644 381 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 MNDAP41218 407 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 GNPDA1P46926 289 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 MC1RQ01726 317 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 ATXN7L2Q5T6C5 722 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 CCDC54Q8NEL0 328 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 AENQ8WTP8 325 aaKnown RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 LENG1Q96BZ8 264 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 CAPNS2Q96L46 248 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 SRMSQ9H3Y6 488 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 LRCH1Q9Y2L9 728 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 HAT1O14929 419 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 DBIP07108 87 aaKnown RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 CDH13P55290 713 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 GFOD2Q3B7J2 385 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 DUSP28Q4G0W2 176 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 RASGRP3Q8IV61 690 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 PSMA8Q8TAA3 256 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 FAR1Q8WVX9 515 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 CKAP2Q8WWK9 683 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 ENPP3O14638 875 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 CASKO14936 926 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 FRRS1Q6ZNA5 592 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 ADGRG6Q86SQ4 1221 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 U3KQV3 271 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 RGS20O76081 388 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 PLGLB1Q02325 96 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 USP4Q13107 963 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 SULT1C3Q6IMI6 304 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 AMIGO2Q86SJ2 522 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 CUZD1Q86UP6 607 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 PCDH18Q9HCL0 1135 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 LRIG2O94898 1065 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 GNALP38405 381 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 RAB25P57735 213 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 HSPB3Q12988 150 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 INTS6LQ5JSJ4 861 aaKnown RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 MED27Q6P2C8 311 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 POTEHQ6S545 545 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 GK5Q6ZS86 529 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms