RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SLC9A6Q92581 669 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 HBEGFQ99075 208 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 SRMSQ9H3Y6 488 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 EPS8L2Q9H6S3 715 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 WDR55Q9H6Y2 383 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-201ENST00000223398 IPPKQ9H8X2 491 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 BATF3Q9NR55 127 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 AP3M1Q9Y2T2 418 aa18.35■□□□□ 0.53
CLIP2-201ENST00000223398 GSTM5P46439 218 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 SPIBQ01892 262 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 INO80DQ53TQ3 878 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-201ENST00000223398 ANXA8L1Q5VT79 327 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 RINLQ6ZS11 566 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 TLR6Q9Y2C9 796 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 TRIM43BA6NCK2 446 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 H3BNH8 94 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 TOP3BO95985 862 aaKnown RBP18.34■□□□□ 0.53
CLIP2-201ENST00000223398 CAPN1P07384 714 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 GNSP15586 552 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 CHRNA4P43681 627 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF460Q14592 562 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 PLEKHG4Q58EX7 1191 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 PCDH19Q8TAB3 1148 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 ADAMTS15Q8TE58 950 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 PMEPA1Q969W9 287 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 SPAG4Q9NPE6 437 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 GEMIN8Q9NWZ8 242 aaKnown RBP18.34■□□□□ 0.53
CLIP2-201ENST00000223398 CORO2BQ9UQ03 480 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 CPED1A4D0V7 1026 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 IRAK2O43187 625 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 SLC22A3O75751 556 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 PDK4Q16654 411 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 VANGL1Q8TAA9 524 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-201ENST00000223398 AZIN2Q96A70 460 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 NMD3Q96D46 503 aaKnown RBP18.34■□□□□ 0.53
CLIP2-201ENST00000223398 RMND5BQ96G75 393 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-201ENST00000223398 CDH19Q9H159 772 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 SDCBP2Q9H190 292 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 DMAC2Q9NW81 257 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 EGFL7Q9UHF1 273 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 SHPRHQ149N8 1683 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 TSTD2Q5T7W7 516 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 ARHGAP36Q6ZRI8 547 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 CAMK1DQ8IU85 385 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 TRIB2Q92519 343 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 JSRP1Q96MG2 331 aaPredicted RBP18.34■□□□□ 0.53
CLIP2-201ENST00000223398 TMEM175Q9BSA9 504 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 SLITRK2Q9H156 845 aa18.34■□□□□ 0.53
CLIP2-201ENST00000223398 SLC6A2P23975 617 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 HNRNPDQ14103 355 aaKnown RBP18.33■□□□□ 0.53
CLIP2-201ENST00000223398 WASHC2DQ5SRD0 308 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF248Q8NDW4 579 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 C6orf62Q9GZU0 229 aaPredicted RBP18.33■□□□□ 0.53
CLIP2-201ENST00000223398 C12orf65Q9H3J6 166 aaKnown RBP18.33■□□□□ 0.53
CLIP2-201ENST00000223398 DDX18Q9NVP1 670 aaKnown RBP18.33■□□□□ 0.53
CLIP2-201ENST00000223398 SERPINB7O75635 380 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 ALPPL2P10696 532 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 ACTR1BP42025 376 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 CTSOP43234 321 aaPredicted RBP18.33■□□□□ 0.53
CLIP2-201ENST00000223398 ACTR1AP61163 376 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 C2orf80Q0P641 193 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 ESAMQ96AP7 390 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 SIPA1Q96FS4 1042 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 TWNKQ96RR1 684 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 SAR1AQ9NR31 198 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 TPRKBQ9Y3C4 175 aa18.33■□□□□ 0.53
CLIP2-201ENST00000223398 SNED1Q8TER0 1413 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 SMIM31A0A1B0GVY4 71 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 RGSL1A5PLK6 1076 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 IDO1P14902 403 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 TNFRSF8P28908 595 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 MASP1P48740 699 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 ZNF155Q12901 538 aaPredicted RBP18.33■□□□□ 0.52
CLIP2-201ENST00000223398 DGCR6Q14129 220 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 CPNE9Q8IYJ1 553 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 EIF1ADQ8N9N8 165 aaKnown RBP18.33■□□□□ 0.52
CLIP2-201ENST00000223398 SMYD1Q8NB12 490 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 XAGE5Q8WWM1 108 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 DNAJC28Q9NX36 388 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 EFR3BQ9Y2G0 817 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 BIRC5O15392 142 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 F2P00734 622 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 CSF2RAP15509 400 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 GPD2P43304 727 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 LPIN1Q14693 890 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 ATP13A5Q4VNC0 1218 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 ZFP1Q6P2D0 407 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 FAM171BQ6P995 826 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 TCAIMQ8N3R3 496 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 RORBQ92753 470 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 GAL3ST4Q96RP7 486 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 LRTM1Q9HBL6 345 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 RPRD1BQ9NQG5 326 aaKnown RBP18.33■□□□□ 0.52
CLIP2-201ENST00000223398 IPO13O94829 963 aaKnown RBP18.33■□□□□ 0.52
CLIP2-201ENST00000223398 CACTIN-AS1Q8N1I8 211 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 CARS2Q9HA77 564 aaKnown RBP18.33■□□□□ 0.52
CLIP2-201ENST00000223398 IL36AQ9UHA7 158 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 IRS2Q9Y4H2 1338 aa18.33■□□□□ 0.52
CLIP2-201ENST00000223398 B4DGG1 531 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms