RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SNX12Q9UMY4 172 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 PKP3Q9Y446 797 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 PCDHGA1Q9Y5H4 931 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ZFC3H1O60293 1989 aaKnown RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 C2orf81A6NN90 581 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 B4DGG1 531 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 E7EVH7 732 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 PGRMC1O00264 195 aaKnown RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 CCL22O00626 93 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 ZNF8P17098 575 aaPredicted RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 GRIA1P42261 906 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 LMAN1P49257 510 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 SEPT6Q14141 434 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 POU6F1Q14863 301 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 TRIP13Q15645 432 aaPredicted RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 TTC27Q6P3X3 843 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 SLC30A9Q6PML9 568 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 LVRNQ6Q4G3 990 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 EFL1Q7Z2Z2 1120 aaKnown RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 ADGRG6Q86SQ4 1221 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 GALNT13Q8IUC8 556 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 OR13C4Q8NGS5 318 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 IFI44Q8TCB0 444 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 BRSK1Q8TDC3 778 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 SCG3Q8WXD2 468 aaKnown RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 MAGOHBQ96A72 148 aaKnown RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 HOMER3Q9NSC5 361 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 SPATS2LQ9NUQ6 558 aaKnown RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 VPS18Q9P253 973 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 PAK5Q9P286 719 aa12.56□□□□□ -0.4
LSM5-201ENST00000223084 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
LSM5-201ENST00000223084 GLYATL1P3A0A0U1RQE8 302 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 CCDC78A2IDD5 438 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 EME2A4GXA9 379 aaPredicted RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 CASC3O15234 703 aaKnown RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 LDB2O43679 373 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 NUAK1O60285 661 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 CRTAMO95727 393 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 APRTP07741 180 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 VPS41P49754 854 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 DUSP3P51452 185 aaPredicted RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 ZNF140P52738 457 aaPredicted RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 TERF1P54274 439 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 BASP1P80723 227 aaKnown RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 SHC2P98077 582 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 ILF3Q12906 894 aaKnown RBP eCLIP12.55□□□□□ -0.4
LSM5-201ENST00000223084 SEMA5AQ13591 1074 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 CERCAMQ5T4B2 595 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 ZDHHC20Q5W0Z9 365 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 CRTC3Q6UUV7 619 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 PPP1R21Q6ZMI0 780 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 PHYKPLQ8IUZ5 450 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 SDR16C5Q8N3Y7 309 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 ARL10Q8N8L6 244 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 ACTRT1Q8TDG2 376 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 GLMNQ92990 594 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 DNAJC1Q96KC8 554 aaKnown RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 GSDMCQ9BYG8 508 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 DPEP2Q9H4A9 486 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 TRIM39Q9HCM9 518 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 TRNAU1APQ9NX07 287 aaKnown RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 TAAR2Q9P1P5 351 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 FEZ2Q9UHY8 353 aaPredicted RBP12.55□□□□□ -0.4
LSM5-201ENST00000223084 PADI4Q9UM07 663 aa12.55□□□□□ -0.4
LSM5-201ENST00000223084 MAP1BP46821 2468 aaKnown RBP12.54□□□□□ -0.4
LSM5-201ENST00000223084 UNC13CQ8NB66 2214 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 ERI2A8K979 691 aaKnown RBP12.54□□□□□ -0.4
LSM5-201ENST00000223084 FANCGO15287 622 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 NOBOXO60393 691 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 PPFIA2O75334 1257 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 SUN1O94901 812 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 ACP5P13686 325 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 COILP38432 576 aaPredicted RBP12.54□□□□□ -0.4
LSM5-201ENST00000223084 ACTR1BP42025 376 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 ACTR1AP61163 376 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 XIAPP98170 497 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 ILKQ13418 452 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 PLA2G4EQ3MJ16 856 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 CCDC38Q502W7 563 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 HES3Q5TGS1 186 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 OGFOD3Q6PK18 319 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 CHST15Q7LFX5 561 aaPredicted RBP12.54□□□□□ -0.4
LSM5-201ENST00000223084 TMPRSS7Q7RTY8 843 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 LINC00523Q86TU6 105 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 DNAAF3Q8N9W5 541 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 GPR156Q8NFN8 814 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 ZNF398Q8TD17 642 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 ZDHHC1Q8WTX9 485 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 VPS35Q96QK1 796 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 NAP1L3Q99457 506 aaPredicted RBP12.54□□□□□ -0.4
LSM5-201ENST00000223084 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 KCNK6Q9Y257 313 aa12.54□□□□□ -0.4
LSM5-201ENST00000223084 ZNF106Q9H2Y7 1883 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms