RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 UGT1A9O60656 530 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 SLC25A14O95258 325 aaPredicted RBP23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A6P19224 532 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 ITGALP20701 1170 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A1P22309 533 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A4P22310 534 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A3P35503 534 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A5P35504 534 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 RXRGP48443 463 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 GPR33Q49SQ1 333 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 ENPP7Q6UWV6 458 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 ZDHHC24Q6UX98 284 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 SNX20Q7Z614 316 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 TMEM135Q86UB9 458 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 HDAC10Q969S8 669 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 MFSD3Q96ES6 412 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 PWWP2AQ96N64 755 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A7Q9HAW7 530 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A10Q9HAW8 530 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 UGT1A8Q9HAW9 530 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 EPB41L5Q9HCM4 733 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 FAM114A2Q9NRY5 505 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 VPS18Q9P253 973 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 PNMA8BQ9ULN7 279 aaPredicted RBP23.41■■□□□ 1.34
HOMER3-201ENST00000221222 SLC17A4Q9Y2C5 497 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 OAS3Q9Y6K5 1087 aaKnown RBP23.41■■□□□ 1.34
HOMER3-201ENST00000221222 SLC30A1Q9Y6M5 507 aa23.41■■□□□ 1.34
HOMER3-201ENST00000221222 TRBV5-4A0A0C4DH59 114 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CCDC162PA2VCL2 907 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 E7ESA3 106 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CEACAM5P06731 702 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 ADRB1P08588 477 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 NME1P15531 152 aaKnown RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CA5AP35218 305 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 ATXN3P54252 364 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 PLTPP55058 493 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CACNG1Q06432 222 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 BBS9Q3SYG4 887 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 AFTPHQ6ULP2 937 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 TRIM74Q86UV6 250 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 MINDY1Q8N5J2 469 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 DDHD1Q8NEL9 900 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 FBXO25Q8TCJ0 367 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 STAMBPL1Q96FJ0 436 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 SCARF2Q96GP6 870 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 EBNA1BP2Q99848 306 aaKnown RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 NAT9Q9BTE0 207 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 EDEM2Q9BV94 578 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 GTPBP2Q9BX10 602 aaKnown RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 FAM129AQ9BZQ8 928 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 FGF22Q9HCT0 170 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 KLQ9UEF7 1012 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 MAD1L1Q9Y6D9 718 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 DGKBQ9Y6T7 804 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 A0A1B0GTQ1 180 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CDX4O14627 284 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 BANF1O75531 89 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 USP1O94782 785 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CSF2P04141 144 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 ARRB1P49407 418 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 SRP54P61011 504 aaKnown RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 PRAMEP78395 509 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 ALG11Q2TAA5 492 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 ANKRD20A4Q4UJ75 823 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 KIAA0930Q6ICG6 404 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CES3Q6UWW8 571 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 ULK4Q96C45 1275 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 PHACTR1Q9C0D0 580 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 TRIM39Q9HCM9 518 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 ZDHHC18Q9NUE0 388 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 DNAAF2Q9NVR5 837 aaKnown RBP23.4■■□□□ 1.34
HOMER3-201ENST00000221222 KLF15Q9UIH9 416 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 TEX264Q9Y6I9 313 aa23.4■■□□□ 1.34
HOMER3-201ENST00000221222 CABIN1Q9Y6J0 2220 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 PRSS38A1L453 326 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 YKT6O15498 198 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 GOT2P00505 430 aaKnown RBP23.39■■□□□ 1.33
HOMER3-201ENST00000221222 ZNF883P0CG24 379 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 PGAM1P18669 254 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 FOXN2P32314 431 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 BLKP51451 505 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 LIMK1P53667 647 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 PPARDQ03181 441 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 SHBQ15464 509 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 LDLRAP1Q5SW96 308 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 PRAMEF14Q5SWL7 426 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 GPRC6AQ5T6X5 926 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 KCTD16Q68DU8 428 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 CCNJLQ8IV13 435 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 OR2I1PQ8NGU4 316 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 OR4L1Q8NH43 312 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 OR1E3Q8WZA6 343 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 PDXPQ96GD0 296 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 TRIM56Q9BRZ2 755 aaKnown RBP23.39■■□□□ 1.33
HOMER3-201ENST00000221222 FOXP3Q9BZS1 431 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 IL21RQ9HBE5 538 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 DNAJC28Q9NX36 388 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 CRLS1Q9UJA2 301 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 RPS6KL1Q9Y6S9 549 aa23.39■■□□□ 1.33
HOMER3-201ENST00000221222 TDRD6O60522 2096 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms