RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SEPT8Q92599 483 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 GFM2Q969S9 779 aaKnown RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 KCTD14Q9BQ13 255 aaPredicted RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 TRIM54Q9BYV2 358 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 POPDC3Q9HBV1 291 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 FADS3Q9Y5Q0 445 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 OAS3Q9Y6K5 1087 aaKnown RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 TCRBV5S2A0A599 114 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 NCF1BA6NI72 391 aaPredicted RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 NCF1CA8MVU1 366 aaPredicted RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 MAGEB3O15480 346 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 KERAO60938 352 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 CYBBP04839 570 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 RPLP2P05387 115 aaKnown RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 HMBSP08397 361 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 NCF1P14598 390 aaPredicted RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 HOXB8P17481 243 aaPredicted RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 PRDX3P30048 256 aaKnown RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 ACVRL1P37023 503 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 IL10RBQ08334 325 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 COQ5Q5HYK3 327 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 DHRS4L2Q6PKH6 230 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 KIAA1191Q96A73 305 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 OSBPL6Q9BZF3 934 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 SLAMF8Q9P0V8 285 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 GMIPQ9P107 970 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 SCML2Q9UQR0 700 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 RAMP2O60895 175 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 VPS4BO75351 444 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 ECI2O75521 394 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 MT-ND1P03886 318 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 ENTPD1P49961 510 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 STC1P52823 247 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 UFM1P61960 85 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 TNK2Q07912 1038 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 TSNQ15631 228 aaKnown RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 ANKS6Q68DC2 871 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 ZNF598Q86UK7 904 aaKnown RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 RTN4RL1Q86UN2 441 aaPredicted RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 MIB1Q86YT6 1006 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 BRSK1Q8TDC3 778 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 TMEM74Q96NL1 305 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 POLR1EQ9GZS1 481 aaKnown RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 SOX17Q9H6I2 414 aaPredicted RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 DNAAF2Q9NVR5 837 aaKnown RBP17.16■□□□□ 0.34
USB1-201ENST00000219281 USP22Q9UPT9 525 aa17.16■□□□□ 0.34
USB1-201ENST00000219281 NLRC5Q86WI3 1866 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 TRIM64A6NGJ6 449 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 TMX2-CTNND1H3BSU7 103 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 FGF1P05230 155 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 FCGR1AP12314 374 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 HLA-DPA1P20036 260 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 VARSP26640 1264 aaKnown RBP17.15■□□□□ 0.34
USB1-201ENST00000219281 GRK4P32298 578 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 RFC2P35250 354 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 PBX3P40426 434 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 ZFP36L2P47974 494 aaKnown RBP17.15■□□□□ 0.34
USB1-201ENST00000219281 PMS2P3Q13401 168 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 SERINC3Q13530 473 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 FAM26DQ5JW98 314 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 CROCCQ5TZA2 2017 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 SPATA19Q7Z5L4 167 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 DHRSXQ8N5I4 330 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 ATP6V0D2Q8N8Y2 350 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 MAGEE2Q8TD90 523 aaPredicted RBP17.15■□□□□ 0.34
USB1-201ENST00000219281 GPR152Q8TDT2 470 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 RPRD1AQ96P16 312 aaPredicted RBP17.15■□□□□ 0.34
USB1-201ENST00000219281 CYP2S1Q96SQ9 504 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 PIF1Q9H611 641 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 CXorf21Q9HAI6 301 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 ANAPC2Q9UJX6 822 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 V9GYQ6 96 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 PTPRDP23468 1912 aa17.15■□□□□ 0.34
USB1-201ENST00000219281 IGLV3-10A0A075B6K4 115 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 CCDC154A6NI56 674 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 CDC7O00311 574 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 B4GALT3O60512 393 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 TYMPP19971 482 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 OGNP20774 298 aaKnown RBP17.14■□□□□ 0.33
USB1-201ENST00000219281 CAPGP40121 348 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 AGTR2P50052 363 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 RCAN2Q14206 197 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 ZNF235Q14590 738 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 SETMARQ53H47 684 aaPredicted RBP17.14■□□□□ 0.33
USB1-201ENST00000219281 ABRAXAS1Q6UWZ7 409 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 SYVN1Q86TM6 617 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 CDKN2AIPNLQ96HQ2 116 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 SEPHS2Q99611 448 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 C1orf50Q9BV19 199 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 HIPK3Q9H422 1215 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 PLGRKTQ9HBL7 147 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 SYTL2Q9HCH5 934 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 CD320Q9NPF0 282 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 AIG1Q9NVV5 245 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 SMPD3Q9NY59 655 aaPredicted RBP17.14■□□□□ 0.33
USB1-201ENST00000219281 ENPP3O14638 875 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 FOXD2O60548 495 aaPredicted RBP17.14■□□□□ 0.33
USB1-201ENST00000219281 AOC2O75106 756 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 ATE1O95260 518 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 ALDH1A1P00352 501 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms