RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 Q6ZSR6 202 aa27.01■■□□□ 1.92
CHMP4B-201ENST00000217402 DENND6AQ8IWF6 608 aa27.01■■□□□ 1.92
CHMP4B-201ENST00000217402 UBLCP1Q8WVY7 318 aaPredicted RBP27.01■■□□□ 1.92
CHMP4B-201ENST00000217402 PIGKQ92643 395 aa27.01■■□□□ 1.92
CHMP4B-201ENST00000217402 CAVIN3Q969G5 261 aa27.01■■□□□ 1.92
CHMP4B-201ENST00000217402 TMEM74BQ9NUR3 256 aa27.01■■□□□ 1.92
CHMP4B-201ENST00000217402 SPAG17Q6Q759 2223 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 TRBV5-4A0A0C4DH59 114 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 AGAP14A8MT82 685 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 BCAT2O15382 392 aaPredicted RBP27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 RIPK2O43353 540 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 ACRV1P26436 265 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 CD38P28907 300 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 MGAT5Q09328 741 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 DBN1Q16643 649 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 DOK6Q6PKX4 331 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 ZFATQ9P243 1243 aa27.01■■□□□ 1.91
CHMP4B-201ENST00000217402 CACNB4O00305 520 aaPredicted RBP27■■□□□ 1.91
CHMP4B-201ENST00000217402 WNT1P04628 370 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 THEGLP0DJG4 465 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 MYCLP1P12525 358 aaPredicted RBP27■■□□□ 1.91
CHMP4B-201ENST00000217402 PMLP29590 882 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 SLC1A2P43004 574 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 RABIFP47224 123 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 CTBP1Q13363 440 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 BRD3Q15059 726 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 KHDC1Q4VXA5 237 aaKnown RBP27■■□□□ 1.91
CHMP4B-201ENST00000217402 AARS2Q5JTZ9 985 aaKnown RBP27■■□□□ 1.91
CHMP4B-201ENST00000217402 TPRG1LQ5T0D9 272 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 CALML6Q8TD86 181 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 CCDC97Q96F63 343 aaPredicted RBP27■■□□□ 1.91
CHMP4B-201ENST00000217402 SMYD2Q9NRG4 433 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 PILRBQ9UKJ0 227 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 RAB23Q9ULC3 237 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 OAS3Q9Y6K5 1087 aaKnown RBP27■■□□□ 1.91
CHMP4B-201ENST00000217402 FANCMQ8IYD8 2048 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 CACNA1HO95180 2353 aa27■■□□□ 1.91
CHMP4B-201ENST00000217402 TNRC6BQ9UPQ9 1833 aaKnown RBP26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 ERLIN1O75477 346 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 AKT1P31749 480 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 THOP1P52888 689 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 PDE1CQ14123 709 aaPredicted RBP26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 EFTUD2Q15029 972 aaKnown RBP eCLIP26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 SDCCAG8Q86SQ7 713 aaPredicted RBP26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 CILP2Q8IUL8 1156 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 DDHD1Q8NEL9 900 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 GPR150Q8NGU9 434 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 KLHDC7BQ96G42 594 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 COX14Q96I36 57 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 EPB41L4BQ9H329 900 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 TMEM98Q9Y2Y6 226 aa26.99■■□□□ 1.91
CHMP4B-201ENST00000217402 A0A1W2PR77 199 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 CCDC151A5D8V7 595 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 KBTBD12Q3ZCT8 623 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 LDLRAP1Q5SW96 308 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 TEDDM1Q5T9Z0 273 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 SLC22A18ASQ8N1D0 253 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 MFSD2AQ8NA29 543 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 NAT14Q8WUY8 206 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 ATOH1Q92858 354 aaPredicted RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 COPS8Q99627 209 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 BOCQ9BWV1 1114 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 SMG5Q9UPR3 1016 aaKnown RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 PLXNB3Q9ULL4 1909 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 UQCRHLA0A096LP55 91 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 CXorf49A8MYA2 514 aaPredicted RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 ASMTLO95671 621 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 UQCRHP07919 91 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 GNSP15586 552 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 OGNP20774 298 aaKnown RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 TTPAP49638 278 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 CSNK1EP49674 416 aaKnown RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 AFF3P51826 1226 aaKnown RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 KIAA1024LP59773 190 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 YPEL5P62699 121 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 MPP1Q00013 466 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 SLC29A2Q14542 456 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 NFATC4Q14934 902 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 UAP1Q16222 522 aaPredicted RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 CERS6Q6ZMG9 384 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 SYT12Q8IV01 421 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 CTAGE3PQ8IX95 158 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 LMNTD2Q8IXW0 634 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 GABPB2Q8TAK5 448 aaPredicted RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 CDKL2Q92772 493 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 TTC1Q99614 292 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 FBXO6Q9NRD1 293 aaPredicted RBP26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 FAM86C1Q9NVL1 165 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 ZDHHC3Q9NYG2 299 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 RABGEF1Q9UJ41 708 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 FBXO5Q9UKT4 447 aa26.98■■□□□ 1.91
CHMP4B-201ENST00000217402 VPS13AQ96RL7 3174 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 A0A087WUV0 522 aaPredicted RBP26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 FAM159BA6NKW6 160 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 C1QAP02745 245 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 HSD17B3P37058 310 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 TYSND1Q2T9J0 566 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 CYS1Q717R9 158 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 CNTN4Q8IWV2 1026 aa26.97■■□□□ 1.91
CHMP4B-201ENST00000217402 OR2AG1Q9H205 316 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms