RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ATP1A4Q13733 1029 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 UGT3A2Q3SY77 523 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 PYCR3Q53H96 274 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 DUS1LQ6P1R4 473 aaKnown RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 TBPL2Q6SJ96 375 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 LARP4Q71RC2 724 aaKnown RBP eCLIP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 SNX29P2Q8IUI4 249 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 RIN3Q8TB24 985 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 KATNAL1Q9BW62 490 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 ING2Q9H160 280 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 EPS8L2Q9H6S3 715 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 PRDM5Q9NQX1 630 aaPredicted RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 OLAHQ9NV23 265 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 SUN2Q9UH99 717 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 PCDHB9Q9Y5E1 797 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 ZSCAN9O15535 394 aaPredicted RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 PSMD3O43242 534 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 DENRO43583 198 aaKnown RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 H6PDO95479 791 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 DNAJB2P25686 324 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 GSK3BP49841 420 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 SGSHP51688 502 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 HERVK_113P63132 956 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 PTGR1Q14914 329 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 MAPRE2Q15555 327 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 VARS2Q5ST30 1063 aaKnown RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 CD300LGQ6UXG3 332 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 FRA10AC1Q70Z53 315 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 PELI3Q8N2H9 469 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 CPSF7Q8N684 471 aaKnown RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 LRRC58Q96CX6 371 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 ERVK-6Q9BXR3 956 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 MRPS26Q9BYN8 205 aaKnown RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 ZNF385DQ9H6B1 395 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 ATP13A1Q9HD20 1204 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 TOR1BO14657 336 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 AKR1A1P14550 325 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 ZNF37AP17032 561 aaPredicted RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 LBPP18428 481 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 CDH2P19022 906 aaPredicted RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 FASP25445 335 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 LEPRP48357 1165 aaKnown RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 NR1H2P55055 460 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 FAM151BQ6UXP7 276 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 SYVN1Q86TM6 617 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 FIBCD1Q8N539 461 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 THAP11Q96EK4 314 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 CINPQ9BW66 212 aaPredicted RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 POLR1EQ9GZS1 481 aaKnown RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 VPS45Q9NRW7 570 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 PTTG2Q9NZH5 202 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 RSL24D1Q9UHA3 163 aaKnown RBP14.98□□□□□ -0.01
EFNB1-201ENST00000204961 OTOFQ9HC10 1997 aa14.98□□□□□ -0.01
EFNB1-201ENST00000204961 CCDC154A6NI56 674 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 K7ERQ8 282 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 FGF10O15520 208 aaPredicted RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 CYP4B1P13584 511 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 IL7RP16871 459 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 GPX3P22352 226 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 SLC6A2P23975 617 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 MC4RP32245 332 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 BNIP3Q12983 259 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 GRM2Q14416 872 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 ANKS6Q68DC2 871 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 FAM171BQ6P995 826 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 TMEM173Q86WV6 379 aaPredicted RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 PHACTR4Q8IZ21 702 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 ARRDC2Q8TBH0 407 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 MYLIPQ8WY64 445 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 MCMBPQ9BTE3 642 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 ADI1Q9BV57 179 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 SMOC2Q9H3U7 446 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 MEAF6Q9HAF1 191 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 SMURF2Q9HAU4 748 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 FARSBQ9NSD9 589 aaKnown RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 RRN3Q9NYV6 651 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 POLR3HQ9Y535 204 aaPredicted RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 DIRAS1O95057 198 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 COL6A2P12110 1019 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 MTHFD2P13995 350 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 SLC2A4P14672 509 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 HSPA7P48741 367 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 TRAF2Q12933 501 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 GTDC1Q4AE62 458 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 RSPO2Q6UXX9 243 aaPredicted RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 TAS1R1Q7RTX1 841 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 GPR141Q7Z602 305 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 CATSPER1Q8NEC5 780 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 TRIB2Q92519 343 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 RANBP9Q96S59 729 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 C17orf80Q9BSJ5 609 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 PRKD2Q9BZL6 878 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 PCDH12Q9NPG4 1184 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 GIT1Q9Y2X7 761 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 FCF1Q9Y324 198 aaKnown RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 FADS3Q9Y5Q0 445 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 STX7O15400 261 aaKnown RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 EPHX4Q8IUS5 362 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 CARNMT1Q8N4J0 409 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 OR2T11Q8NH01 316 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms