RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 C12orf42Q96LP6 360 aa11.96□□□□□ -0.5
TRO-201ENST00000173898 SAMD4AQ9UPU9 718 aaKnown RBP11.96□□□□□ -0.5
TRO-201ENST00000173898 PRAMEF1O95521 474 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 ADSLP30566 484 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 BUD31P41223 144 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 MED22Q15528 200 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TAB1Q15750 504 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 KCNA10Q16322 511 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 IZUMO1Q8IYV9 350 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 CAMKK1Q8N5S9 505 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TIFAQ96CG3 184 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 SPACA7Q96KW9 195 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 SLITRK2Q9H156 845 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 CCNB1IP1Q9NPC3 277 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 ARHGEF3Q9NR81 526 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 DNAJC11Q9NVH1 559 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 CRNNQ9UBG3 495 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 CACNG4Q9UBN1 327 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 POMPQ9Y244 141 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 GRIN2DO15399 1336 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 A0A1B0GVM2 712 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TCAF2A6NFQ2 919 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 SNPHO15079 494 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TCEA3O75764 348 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 STBD1O95210 358 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 OR6A2O95222 327 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 NADKO95544 446 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 GOT2P00505 430 aaKnown RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 BMP7P18075 431 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 WARSP23381 471 aaKnown RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 RPIAP49247 311 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 UGT2B15P54855 530 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 MANFP55145 182 aaKnown RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 CREMQ03060 361 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 SYPL2Q5VXT5 272 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 DEF8Q6ZN54 512 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 CLIP3Q96DZ5 547 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 SLC38A2Q96QD8 506 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 FNDC11Q9BVV2 318 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 MAGEH1Q9H213 219 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 HIPK3Q9H422 1215 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 SGK2Q9HBY8 427 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 RASSF1Q9NS23 344 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 DMTF1Q9Y222 760 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 SLC7A4O43246 635 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 PIGRP01833 764 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 IFNA16P05015 189 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 CAPN13Q6MZZ7 669 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 RAVER1Q8IY67 606 aaKnown RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 SCAMP5Q8TAC9 235 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TDRD1Q9BXT4 1180 aaKnown RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 SLC39A8Q9C0K1 460 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 EIF2B3Q9NR50 452 aaKnown RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 TMEM59LQ9UK28 342 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 DPPA5A6NC42 116 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 H3BM21 787 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TNFRSF21O75509 655 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 OR4F21O95013 312 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 AMD1P17707 334 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 MTHFRP42898 656 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 NAE1Q13564 534 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 ZNHIT3Q15649 155 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 DEFB115Q30KQ5 88 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 DDI2Q5TDH0 399 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TMPRSS11BQ86T26 416 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 TMEM199Q8N511 208 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 ZNF655Q8N720 491 aaPredicted RBP11.95□□□□□ -0.5
TRO-201ENST00000173898 SMYD1Q8NB12 490 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 PTGFRNQ9P2B2 879 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 RBPJLQ9UBG7 517 aa11.95□□□□□ -0.5
TRO-201ENST00000173898 AP3D1O14617 1153 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 LIN7AO14910 233 aaPredicted RBP11.94□□□□□ -0.5
TRO-201ENST00000173898 TMCC2O75069 709 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 SPAM1P38567 509 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 SRP54P61011 504 aaKnown RBP11.94□□□□□ -0.5
TRO-201ENST00000173898 CACNG1Q06432 222 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 MPPE1Q53F39 396 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 ACSBG2Q5FVE4 666 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 KIAA1324Q6UXG2 1013 aaKnown RBP11.94□□□□□ -0.5
TRO-201ENST00000173898 COMMD2Q86X83 199 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 CPNE9Q8IYJ1 553 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 GLIS1Q8NBF1 620 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 C10orf82Q8WW14 230 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 DEFB118Q96PH6 123 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 ZNF607Q96SK3 696 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 ALG2Q9H553 416 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 SLC17A6Q9P2U8 582 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 C3P01024 1663 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 ELOVL7A1L3X0 281 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 NEMP2A6NFY4 417 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 INSIG1O15503 277 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 GLUD1P00367 558 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 CAPN1P07384 714 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 NR2F6P10588 404 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 SSR2P43308 183 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 BLMHQ13867 455 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms