RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 NPEPPSL1A6NEC2 478 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 H3BNC9 293 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 TMX2-CTNND1H3BSU7 103 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 SOCS2O14508 198 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 PIP5K1BO14986 540 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 INSIG1O15503 277 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 TBC1D4O60343 1298 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 STC2O76061 302 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 PRLP01236 227 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ALDOCP09972 364 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 ZDHHC11BP0C7U3 371 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 MTHFD2P13995 350 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CTPS1P17812 591 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 PRDX3P30048 256 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 HK2P52789 917 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 MAPK10P53779 464 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ADARP55265 1226 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 HERVK_113P63132 956 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 SEMG2Q02383 582 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 TMEM259Q4ZIN3 620 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ATXN7L2Q5T6C5 722 aaPredicted RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 NPAS4Q8IUM7 802 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ZNF786Q8N393 782 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 BBS5Q8N3I7 341 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 AFAP1L2Q8N4X5 818 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 SIDT2Q8NBJ9 832 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 SEPT8Q92599 483 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 C19orf60Q96EN9 201 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 SPATA17Q96L03 361 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 SLC22A12Q96S37 553 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 ERVK-6Q9BXR3 956 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 PIF1Q9H611 641 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 CNOT6Q9ULM6 557 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 TDRKHQ9Y2W6 561 aaKnown RBP13.06□□□□□ -0.32
CTNS-201ENST00000046640 RAI2Q9Y5P3 530 aa13.06□□□□□ -0.32
CTNS-201ENST00000046640 NR5A2O00482 541 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 MT-ND1P03886 318 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 CHRM3P20309 590 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 MZF1P28698 734 aaPredicted RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 EEF1DP29692 281 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 CA8P35219 290 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 APOFQ13790 326 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 SLC14A2Q15849 920 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 TAS2R42Q7RTR8 314 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 CCDC97Q96F63 343 aaPredicted RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 CAPNS2Q96L46 248 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 TRIB3Q96RU7 358 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 TM6SF2Q9BZW4 377 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 EPB41L1Q9H4G0 881 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 TMCO1Q9UM00 188 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 FCF1Q9Y324 198 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 A0A0J9YVX5 310 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 H7C4K7 107 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 K7ERQ8 282 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 BTN3A1O00481 513 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 CLASP2O75122 1294 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 C1RP00736 705 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 PENKP01210 267 aaPredicted RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 ITGB6P18564 788 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 DNAJB1P25685 340 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 HOXD10P28358 340 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 RPL26P61254 145 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 STX5Q13190 355 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 VPS26BQ4G0F5 336 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 SPPL2CQ8IUH8 684 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 CHERPQ8IWX8 916 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 DDI1Q8WTU0 396 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 TUBGCP3Q96CW5 907 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 PSKH2Q96QS6 385 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 HBEGFQ99075 208 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 AARSD1Q9BTE6 412 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 MAGEH1Q9H213 219 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 RSL24D1Q9UHA3 163 aaKnown RBP13.05□□□□□ -0.32
CTNS-201ENST00000046640 MED16Q9Y2X0 877 aa13.05□□□□□ -0.32
CTNS-201ENST00000046640 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 WISP3O95389 354 aaPredicted RBP13.04□□□□□ -0.32
CTNS-201ENST00000046640 SNRPB2P08579 225 aaKnown RBP13.04□□□□□ -0.32
CTNS-201ENST00000046640 CES1P23141 567 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 GKP32189 559 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 MC4RP32245 332 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 CASP2P42575 452 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 CDH4P55283 916 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 RHDQ02161 417 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 NOGQ13253 232 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 LRP8Q14114 963 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 SETMARQ53H47 684 aaPredicted RBP13.04□□□□□ -0.32
CTNS-201ENST00000046640 CLVS1Q8IUQ0 354 aaPredicted RBP13.04□□□□□ -0.32
CTNS-201ENST00000046640 RMND5BQ96G75 393 aaPredicted RBP13.04□□□□□ -0.32
CTNS-201ENST00000046640 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 SOX17Q9H6I2 414 aaPredicted RBP13.04□□□□□ -0.32
CTNS-201ENST00000046640 SPAG4Q9NPE6 437 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 VPS28Q9UK41 221 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 CROTQ9UKG9 612 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms