RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 KCNK10P57789 538 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 AFMIDQ63HM1 303 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 AGMOQ6ZNB7 445 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 ACDQ96AP0 544 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 B3GALT6Q96L58 329 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 PPM1MQ96MI6 270 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 CYP2S1Q96SQ9 504 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 SP110Q9HB58 689 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 ZNF225Q9UK10 706 aa13.95□□□□□ -0.18
USH1C-201ENST00000005226 A0A0U1RQS6 177 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 A0A1W2PP18 115 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 K7EPI3 171 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 MUSKO15146 869 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 CYBBP04839 570 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 IL7RP16871 459 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 MAP4P27816 1152 aaKnown RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 CDKN1CP49918 316 aaPredicted RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 RENBPP51606 427 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 FAM171BQ6P995 826 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 SYVN1Q86TM6 617 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 HS3ST5Q8IZT8 346 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 ARRDC2Q8TBH0 407 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 CSF3RQ99062 836 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 SEMA3CQ99985 751 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 ADNPQ9H2P0 1102 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 SELENONQ9NZV5 590 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 RNF112Q9ULX5 631 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 SH3GLB1Q9Y371 365 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 MIA3Q5JRA6 1907 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 FNDC1Q4ZHG4 1894 aaPredicted RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 C1orf232A0A0U1RR37 186 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 CCDC154A6NI56 674 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 SYNCRIPO60506 623 aaKnown RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 ECI2O75521 394 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 INHBBP09529 407 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 CYP2C18P33260 490 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 MTPNP58546 118 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 ADARB1P78563 741 aaKnown RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 YWHAHQ04917 246 aaPredicted RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 NFATC3Q12968 1075 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
USH1C-201ENST00000005226 FSCN1Q16658 493 aaKnown RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 UPP1Q16831 310 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 ZNF829Q3KNS6 432 aaPredicted RBP13.94□□□□□ -0.18
USH1C-201ENST00000005226 BRMS1LQ5PSV4 323 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 FAM117BQ6P1L5 589 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 CENPSQ8N2Z9 138 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 FBXO39Q8N4B4 442 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 SNX19Q92543 992 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.94□□□□□ -0.18
USH1C-201ENST00000005226 SLC10A4Q96EP9 437 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 COX4I2Q96KJ9 171 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 NTN4Q9HB63 628 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 PFDN4Q9NQP4 134 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 ABCC13Q9NSE7 274 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.94□□□□□ -0.18
USH1C-201ENST00000005226 COQ6Q9Y2Z9 468 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 BRCA2P51587 3418 aa13.94□□□□□ -0.18
USH1C-201ENST00000005226 NPEPPSL1A6NEC2 478 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 RHOBTB1O94844 696 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 GPIP06744 558 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 OCM2P0CE71 109 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 OCMP0CE72 109 aaPredicted RBP13.93□□□□□ -0.18
USH1C-201ENST00000005226 ACVRL1P37023 503 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 ARL1P40616 181 aaPredicted RBP13.93□□□□□ -0.18
USH1C-201ENST00000005226 NFKB2Q00653 900 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 IMPG1Q17R60 797 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 SETMARQ53H47 684 aaPredicted RBP13.93□□□□□ -0.18
USH1C-201ENST00000005226 GALNT18Q6P9A2 607 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 DCDC5Q6ZRR9 648 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 BORCS5Q969J3 196 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 IGSF8Q969P0 613 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 SMURF2Q9HAU4 748 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 EXD2Q9NVH0 621 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 DGKBQ9Y6T7 804 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 UNCXA6NJT0 531 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 SLC22A3O75751 556 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 MATN4O95460 622 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 ALBP02768 609 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 IDO1P14902 403 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 DGKQP52824 942 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 CD300CQ08708 224 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 ITGADQ13349 1161 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 BFSP2Q13515 415 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 LAPTM5Q13571 262 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 PTPRRQ15256 657 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 IRAK1BP1Q5VVH5 260 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 GLYATQ6IB77 296 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 STK32CQ86UX6 486 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 FAM86B1Q8N7N1 296 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 DDHD1Q8NEL9 900 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 MYEOVQ96EZ4 313 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 GLT1D1Q96MS3 346 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 DOK1Q99704 481 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 LHPPQ9H008 270 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 SMOC2Q9H3U7 446 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 FLRT1Q9NZU1 646 aa13.93□□□□□ -0.18
USH1C-201ENST00000005226 UTS2RQ9UKP6 389 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms