RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Nt5cQ9JM14 200 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 IL36RNQ9QYY1 156 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Net1Q9Z206 595 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Mki67E9PVX6 3177 aaKnown RBP14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Rev3lQ61493 3122 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Auts2A0A087WPF7 1261 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 R3hdmlA2A5I3 253 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Lzts3A2AHG0 700 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Tsc22d2E9Q7M2 769 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gm6408J3QNG1 320 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gm3402K7N5P2 326 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ncam2O35136 837 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Bmpr2O35607 1038 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Pou5f1P20263 352 aaKnown RBP14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gsta4P24472 222 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Man1a1P45700 655 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ap2m1P84091 435 aaKnown RBP14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ccdc127Q3TC33 260 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Esrp1Q3US41 680 aaKnown RBP14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Itpripl2Q3UV16 535 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Nlrp9cQ66X01 1004 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Zswim9Q6DI92 447 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 PianpQ6P1B3 278 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Trappc6aQ78XR0 159 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 HhipQ7TN16 700 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Lrp10Q7TQH7 713 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Olfr309Q7TS01 308 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Mettl20Q80ZM3 255 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Tbx10Q810F8 385 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 B430218F22RikQ8BQR5 223 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Fam177a1Q8BR63 207 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Pi15Q8BS03 258 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Crispld1Q8CGD2 500 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 NeproQ8R2U2 564 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Vps39Q8R5L3 886 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ubap2Q91VX2 1132 aaKnown RBP14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Dnajc3Q91YW3 504 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gtpbp3Q923K4 492 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Hapln1Q9QUP5 356 aaKnown RBP14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Clcn2Q9R0A1 908 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 TectaO08523 2155 aa14.6□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gm9774A0A0A6YVU8 407 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 AF366264G3X9P9 502 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Angpt1O08538 498 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Bhlhe40O35185 411 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Mid1O70583 680 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 TrhrP21761 393 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Mcpt4P21812 246 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 AvpP35455 168 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Hmx2P43687 273 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Csrp3P50462 194 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Tmem207P86045 143 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Pih1d3Q3KNI6 218 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Fam160a1Q505K2 1081 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Armc5Q5EBP3 926 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Glp2rQ5IXF8 512 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Hif1aQ61221 836 aaKnown RBP14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Hbs1lQ69ZS7 682 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ppm1lQ8BHN0 360 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 E330017A01RikQ8BU47 192 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Parp9Q8CAS9 866 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Tgif2lx2Q8K5B9 231 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Kctd5Q8VC57 234 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Vmn1r71Q8VIC0 307 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Fam3cQ91VU0 227 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Golga1Q9CW79 758 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Zfp655Q9CZP3 541 aaKnown RBP14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Mdm1Q9D067 708 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gbe1Q9D6Y9 702 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Dus2Q9D7B1 493 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Vps35Q9EQH3 796 aaKnown RBP14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gbp2Q9Z0E6 589 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Aldh18a1Q9Z110 795 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 RgrQ9Z2B3 291 aa14.59□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Col12a1Q60847 3120 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Chd7A2AJK6 2986 aaKnown RBP14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Grin3aA2AIR5 1135 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pdzd7E9Q9W7 1021 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Zfp871G5E905 615 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slc27a2O35488 620 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 CblP22682 913 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Akt1P31750 480 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cyp2a12P56593 492 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Stmn4P63042 189 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cyb5r2Q3KNK3 276 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Atxn7l3bQ3UD01 97 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 ADGRF3Q58Y75 991 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Taok1Q5F2E8 1001 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Foxd4Q60688 444 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Irf4Q64287 450 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cyp2d40Q6P8N9 338 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Paqr6Q6TCG5 343 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Nemp1Q6ZQE4 437 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 TwistnbQ78WZ7 330 aaKnown RBP14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tmem214Q8BM55 687 aaKnown RBP14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 TbcdQ8BYA0 1196 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Acat2Q8CAY6 397 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 C1raQ8CG16 707 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Asb18Q8VHA6 467 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pcdhga10Q91XY9 930 aa14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms