RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 YPEL5P62699 121 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 MGAT5Q09328 741 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 SRSF5Q13243 272 aaKnown RBP12.23□□□□□ -0.45
LINC00339-213ENST00000642137 NFATC2Q13469 925 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 INPP5AQ14642 412 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 RAET1GQ6H3X3 334 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 MRNIPQ6NTE8 343 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 CEP68Q76N32 757 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 SDCCAG8Q86SQ7 713 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-213ENST00000642137 CNTN4Q8IWV2 1026 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 PELI3Q8N2H9 469 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 MREGQ8N565 214 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 TMEM145Q8NBT3 493 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 PLA2G15Q8NCC3 412 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 C1orf216Q8TAB5 229 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 CDKL2Q92772 493 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 SERAC1Q96JX3 654 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 HSPA12BQ96MM6 686 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 TCF12Q99081 682 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 TTC1Q99614 292 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 APOOQ9BUR5 198 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 TEX101Q9BY14 249 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 CATSPERZQ9NTU4 200 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 SMOXQ9NWM0 555 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 EIF2B4Q9UI10 523 aaKnown RBP12.23□□□□□ -0.45
LINC00339-213ENST00000642137 CRLS1Q9UJA2 301 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 CNOT6Q9ULM6 557 aaKnown RBP12.23□□□□□ -0.45
LINC00339-213ENST00000642137 FNDC3AQ9Y2H6 1198 aaKnown RBP12.23□□□□□ -0.45
LINC00339-213ENST00000642137 FANCMQ8IYD8 2048 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 PLXNB3Q9ULL4 1909 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 A0A087WUV0 522 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 FAM159BA6NKW6 160 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 FADS2P1A8MWK0 482 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 K7ESM1 405 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 PFDN6O15212 129 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 ACSL3O95573 720 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 PCCBP05166 539 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 OGNP20774 298 aaKnown RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 MAOBP27338 520 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 IGFALSP35858 605 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 DHPSP49366 369 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 CDKN1CP49918 316 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 PFN3P60673 137 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 RACK1P63244 317 aaKnown RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 SIM2Q14190 667 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 SLC29A2Q14542 456 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 AARS2Q5JTZ9 985 aaKnown RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 LDLRAP1Q5SW96 308 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 TEDDM1Q5T9Z0 273 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 PSAPL1Q6NUJ1 521 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 ZC3H14Q6PJT7 736 aaKnown RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 CAPN12Q6ZSI9 719 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 TAS2R42Q7RTR8 314 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 ABI3BPQ7Z7G0 1075 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 GALNT7Q86SF2 657 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 RGL4Q8IZJ4 473 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 FBF1Q8TES7 1133 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 HEXDCQ8WVB3 486 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 UBLCP1Q8WVY7 318 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 SNX19Q92543 992 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 GLYATL1Q969I3 302 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 COX14Q96I36 57 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 HIC2Q96JB3 615 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 FAM167BQ9BTA0 163 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 IRF2BPLQ9H1B7 796 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 KCNH6Q9H252 994 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 EPB41L4BQ9H329 900 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 FAM96AQ9H5X1 160 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 FZD3Q9NPG1 666 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 PHPT1Q9NRX4 125 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 IARS2Q9NSE4 1012 aaKnown RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-213ENST00000642137 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 ZDHHC3Q9NYG2 299 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 RABGEF1Q9UJ41 708 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 TMPRSS11EQ9UL52 423 aa12.22□□□□□ -0.45
LINC00339-213ENST00000642137 ZNF318Q5VUA4 2279 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 POM121BA6NF01 834 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 PRR5-ARHGAP8B1AHC4 643 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 GOLGA8KD6RF30 607 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 GOLGA8TH3BQL2 631 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 SLC25A14O95258 325 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-213ENST00000642137 C1QAP02745 245 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 ACRV1P26436 265 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 CD38P28907 300 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 CA5AP35218 305 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 DPP6P42658 865 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 PTGER3P43115 390 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 RABIFP47224 123 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 TTPAP49638 278 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 CLDN2P57739 230 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 CDK3Q00526 305 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 OVGP1Q12889 678 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 NAB1Q13506 487 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 SEMA3AQ14563 771 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 ITIH4Q14624 930 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms