RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 NOD2Q9HC29 1040 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 RBM22Q9NW64 420 aaKnown RBP eCLIP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 KCNK4Q9NYG8 393 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 IL36AQ9UHA7 158 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 GGT7Q9UJ14 662 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 TTC7AQ9ULT0 858 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 FADS3Q9Y5Q0 445 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 SPTBP11277 2137 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 SEC16AO15027 2179 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 C1QTNF3-AMACRE9PGA6 284 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 KPNA3O00505 521 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CES2O00748 559 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 KCNN4O15554 427 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 AP1G1O43747 822 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 PAK4O96013 591 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 PRNPP04156 253 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 JUNDP17535 347 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 TCP1P17987 556 aaKnown RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 NFKB1P19838 968 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 AKT2P31751 481 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 HSPA9P38646 679 aaKnown RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 RECQLP46063 649 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CSNK1DP48730 415 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 SCNN1BP51168 640 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 RENBPP51606 427 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 AP1S1P61966 158 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CCL7P80098 99 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 TRAF2Q12933 501 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 TTC27Q6P3X3 843 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 DARS2Q6PI48 645 aaKnown RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ERN2Q76MJ5 926 aaKnown RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 BZW1Q7L1Q6 419 aaKnown RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 DSG4Q86SJ6 1040 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 PRUNE1Q86TP1 453 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ZSCAN30Q86W11 494 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 PTRH1Q86Y79 214 aaKnown RBP7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CAMK1DQ8IU85 385 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CREG2Q8IUH2 290 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 SFTPA2Q8IWL1 248 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF567Q8N184 647 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 FBXO39Q8N4B4 442 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 FAM26EQ8N5C1 309 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 FAM71DQ8N9W8 422 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 GLIS1Q8NBF1 620 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 KYQ8NBH2 561 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 TTC13Q8NBP0 860 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 WDR48Q8TAF3 677 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC110Q8TBZ0 833 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ACTRT1Q8TDG2 376 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 NSMCE1Q8WV22 266 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ASB12Q8WXK4 309 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC74AQ96AQ1 378 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CENPTQ96BT3 561 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC114Q96M63 670 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 AGAP3Q96P47 875 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 HEPHQ9BQS7 1158 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 TMEM121Q9BTD3 319 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 AP1M1Q9BXS5 423 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 SLC17A9Q9BYT1 436 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 FOXP3Q9BZS1 431 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ABCG4Q9H172 646 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 TUBD1Q9UJT1 453 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ITM2BQ9Y287 266 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 ATP8A1Q9Y2Q0 1164 aa7.4□□□□□ -1.22
PHGDH-225ENST00000641720 PCM1Q15154 2024 aa7.4□□□□□ -1.23
PHGDH-225ENST00000641720 CCDC168Q8NDH2 2452 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 DOCK10Q96BY6 2186 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 NUP210LQ5VU65 1888 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PCSK5Q92824 1860 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 TSPAN11A1L157 253 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 C16orf96A6NNT2 1141 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 TRAFD1O14545 582 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 YY2O15391 372 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 MTSS1O43312 755 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 POP4O95707 220 aaKnown RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PRKCGP05129 697 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SFTPCP11686 197 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 ADRB3P13945 408 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 ETS1P14921 441 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 TSHRP16473 764 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 POU3F2P20265 443 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 CASQ1P31415 396 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 DEKP35659 375 aaKnown RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 CD86P42081 329 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 CCR10P46092 362 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 RABIFP47224 123 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 KCNJ1P48048 391 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 NSUN2Q08J23 767 aaKnown RBP eCLIP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 C1orf61Q13536 156 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PDE1CQ14123 709 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SPIDRQ14159 915 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 C16orf72Q14CZ0 275 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PTPRRQ15256 657 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 TEX44Q53QW1 395 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 KIAA1161Q6NSJ0 714 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 GDPD4Q6W3E5 623 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 PHACTR4Q8IZ21 702 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 SDR16C5Q8N3Y7 309 aa7.39□□□□□ -1.23
PHGDH-225ENST00000641720 TP53I13Q8NBR0 393 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms