RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PTPRNQ16849 979 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 PARP15Q460N3 678 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 PAGE3Q5JUK9 113 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 ZBTB49Q6ZSB9 765 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 SLC24A5Q71RS6 500 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 C16orf59Q7L2K0 433 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 SYVN1Q86TM6 617 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 CBR4Q8N4T8 237 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 CATSPER1Q8NEC5 780 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 FEM1CQ96JP0 617 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 FAM193BQ96PV7 902 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-223ENST00000641597 GPATCH1Q9BRR8 931 aaKnown RBP16.74■□□□□ 0.27
PHGDH-223ENST00000641597 TRMOQ9BU70 441 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 SMIM31A0A1B0GVY4 71 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 ANGPT2O15123 496 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 HTRA2O43464 458 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 IGLV3-27P01718 113 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 FGF1P05230 155 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 ATF6P18850 670 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 HK3P52790 923 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 UFM1P61960 85 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 NFKB2Q00653 900 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 PLOD1Q02809 727 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 MAP7D1Q3KQU3 841 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 TMEM126BQ8IUX1 230 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 DENND1CQ8IV53 801 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 MIER2Q8N344 545 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 FBXO39Q8N4B4 442 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 LPCAT1Q8NF37 534 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 BHMTQ93088 406 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 FUBP1Q96AE4 644 aaKnown RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 FUBP3Q96I24 572 aaKnown RBP eCLIP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 TLR8Q9NR97 1041 aaKnown RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 FKBPLQ9UIM3 349 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 CBX4O00257 560 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 SEC24DO94855 1032 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 RTN3O95197 1032 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 PRAMEF12O95522 483 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 RPL26P61254 145 aaKnown RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 GLT6D1Q7Z4J2 308 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 SAPCD2Q86UD0 394 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 OR2T34Q8NGX1 318 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 OR2T3Q8NH03 318 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 MUC3BQ9H195 1237 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 OLAHQ9NV23 265 aa16.73■□□□□ 0.27
PHGDH-223ENST00000641597 EVLQ9UI08 416 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-223ENST00000641597 DLGAP1O14490 977 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 KLKB1P03952 638 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 HLA-DPA1P20036 260 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 ACADVLP49748 655 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 ZNF140P52738 457 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-223ENST00000641597 GNA12Q03113 381 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 RPS6KA2Q15349 733 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 TBCELQ5QJ74 424 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 CARM1Q86X55 608 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 FAM47BQ8NA70 645 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 OR52B6Q8NGF0 335 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 EEF1AKMT1Q8WVE0 214 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 BIRC8Q96P09 236 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 MRPS26Q9BYN8 205 aaKnown RBP16.72■□□□□ 0.27
PHGDH-223ENST00000641597 SLC52A3Q9NQ40 469 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 CRCPO75575 148 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 NDST3O95803 873 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 SLC5A2P31639 672 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 SUOXP51687 545 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 BIRC2Q13490 618 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 GALNT7Q86SF2 657 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 GABPB2Q8TAK5 448 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-223ENST00000641597 LRRC58Q96CX6 371 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 IL37Q9NZH6 218 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 EIF2B4Q9UI10 523 aaKnown RBP16.72■□□□□ 0.27
PHGDH-223ENST00000641597 NDUFAF1Q9Y375 327 aa16.72■□□□□ 0.27
PHGDH-223ENST00000641597 ANKRD36A6QL64 1941 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 FAM92AA1XBS5 289 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 F5H5T6 163 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 IRF1P10914 325 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 ARL1P40616 181 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-223ENST00000641597 ZFP36L2P47974 494 aaKnown RBP16.71■□□□□ 0.27
PHGDH-223ENST00000641597 TRAP1Q12931 704 aaKnown RBP16.71■□□□□ 0.27
PHGDH-223ENST00000641597 RGMBQ6NW40 437 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 CPNE9Q8IYJ1 553 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 TSPAN14Q8NG11 270 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 BCL7CQ8WUZ0 217 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-223ENST00000641597 PLEKHG4BQ96PX9 1271 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 CCT7Q99832 543 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 SDR39U1Q9NRG7 319 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-223ENST00000641597 INTS7Q9NVH2 962 aaKnown RBP16.71■□□□□ 0.27
PHGDH-223ENST00000641597 MARCH5Q9NX47 278 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 FNIP2Q9P278 1114 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
PHGDH-223ENST00000641597 GOLGA8CPA6NN73 597 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 NDUFS3O75489 264 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 FGF4P08620 206 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 LBPP18428 481 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 CA5AP35218 305 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 LCP2Q13094 533 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 TYSND1Q2T9J0 566 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 TIGD2Q4W5G0 525 aa16.71■□□□□ 0.26
PHGDH-223ENST00000641597 NHSL2Q5HYW2 709 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms