RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 PEX6Q13608 980 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 CYP2A13Q16696 494 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 RNASEH2BQ5TBB1 312 aaKnown RBP17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 TATDN1Q6P1N9 297 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 CSPG4P5Q96PW8 444 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 STOX2Q9P2F5 926 aaPredicted RBP17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 TRAF6Q9Y4K3 522 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 CLDN25C9JDP6 229 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 MFSD11O43934 449 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 CD48P09326 243 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 SNHG28P0DPA3 235 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 GPAT3Q53EU6 434 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 SDHAF4Q5VUM1 108 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 DENND1CQ8IV53 801 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 ERMAPQ96PL5 475 aaPredicted RBP17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 A0A0J9YYE9 177 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 ITIH1P19827 911 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 SLC25A52Q3SY17 297 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 THAP5Q7Z6K1 395 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 SCAIQ8N9R8 606 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 MINDY2Q8NBR6 621 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 RASSF5Q8WWW0 418 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 RASSF1Q9NS23 344 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 NR2E1Q9Y466 385 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 ANKDD1BA6NHY2 528 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 PLK4O00444 970 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 GRM5P41594 1212 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 E2F2Q14209 437 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 SETMARQ53H47 684 aaPredicted RBP17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 DSELQ8IZU8 1212 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 OR4L1Q8NH43 312 aa17.16■□□□□ 0.34
HNRNPU-217ENST00000638952 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.16■□□□□ 0.344e-8■□□□□ 9
HNRNPU-217ENST00000638952 TRAFD1O14545 582 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 SEMA5AQ13591 1074 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 RAPSNQ13702 412 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 GALNT5Q7Z7M9 940 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 TBC1D21Q8IYX1 336 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 GAL3ST3Q96A11 431 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 LINGO1Q96FE5 620 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 CIB1Q99828 191 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 IRGMA1A4Y4 181 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 CCRL2O00421 344 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 LRCH4O75427 683 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 RBMXL2O75526 392 aaKnown RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 NR4A1P22736 598 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 CTSKP43235 329 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 SLC5A3P53794 718 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 DLG2Q15700 870 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 ARRDC4Q8NCT1 418 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 RHOJQ9H4E5 214 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 EIF3KQ9UBQ5 218 aaKnown RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 VWA7Q9Y334 891 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 CCDC189A1A4V9 331 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 SLC22A3O75751 556 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 TUFMP49411 452 aaKnown RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 FSTL1Q12841 308 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 PRAMEF19Q5SWL8 479 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 SATL1Q86VE3 508 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 SPPL2CQ8IUH8 684 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 SPAG16Q8N0X2 631 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 GRIN3AQ8TCU5 1115 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 ATL1Q8WXF7 558 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 SLC9A6Q92581 669 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 EXOC2Q96KP1 924 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 QRFPRQ96P65 431 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 CLCC1Q96S66 551 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 GPATCH1Q9BRR8 931 aaKnown RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 GRHL1Q9NZI5 618 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 DNMT3LQ9UJW3 386 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 VPS4AQ9UN37 437 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 NPEPPSL1A6NEC2 478 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 OTCP00480 354 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 CST3P01034 146 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 CHRNB2P17787 502 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 OTOP3Q7RTS5 596 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 HM13Q8TCT9 377 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 EFHD2Q96C19 240 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 UROC1Q96N76 676 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 UCKL1Q9NWZ5 548 aa17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 UXTQ9UBK9 157 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-217ENST00000638952 MID1O15344 667 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 LRATO95237 230 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 C2P06681 752 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 PRKG2Q13237 762 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 C6orf183Q5T699 404 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 C9orf57Q5W0N0 161 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 PLD5Q8N7P1 536 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 U3KQV3 271 aa17.14■□□□□ 0.34
HNRNPU-217ENST00000638952 MAGEC1O60732 1142 aa17.14■□□□□ 0.33
HNRNPU-217ENST00000638952 PGRP06401 933 aa17.14■□□□□ 0.33
HNRNPU-217ENST00000638952 MRPS6P82932 125 aaKnown RBP17.14■□□□□ 0.33
HNRNPU-217ENST00000638952 ECT2LQ008S8 904 aa17.14■□□□□ 0.33
HNRNPU-217ENST00000638952 RD3Q7Z3Z2 195 aa17.14■□□□□ 0.33
HNRNPU-217ENST00000638952 FAM35AQ86V20 835 aa17.14■□□□□ 0.33
HNRNPU-217ENST00000638952 TRAPPC5Q8IUR0 188 aa17.14■□□□□ 0.33
HNRNPU-217ENST00000638952 UBE2J2Q8N2K1 259 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms