RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CISHQ9NSE2 258 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 PACSIN3Q9UKS6 424 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 PER1O15534 1290 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 FAM228BP0C875 321 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 FBXO47Q5MNV8 452 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 RNF148Q8N7C7 305 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF668Q96K58 619 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF347Q96SE7 839 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 TBC1D10AQ9BXI6 508 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 CHD3Q12873 2000 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 PRAMEF1O95521 474 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 ITGA2BP08514 1039 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 ITPKBP27987 946 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 THPOP40225 353 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 PDK4Q16654 411 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 PPCDCQ96CD2 204 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 LIN37Q96GY3 246 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 KXD1Q9BQD3 176 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 TUBP50607 506 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 PLK1P53350 603 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 SEC14L1Q92503 715 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 PTTG2Q9NZH5 202 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 DCST1Q5T197 706 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF175Q9Y473 711 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 CYP4B1P13584 511 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 MGAT1P26572 445 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 RAB10P61026 200 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 OR5B12Q96R08 314 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 RANBP3Q9H6Z4 567 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 TRPV2Q9Y5S1 764 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 FABP12A6NFH5 140 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 HDAC3O15379 428 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 THEGLP0DJG4 465 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 TMEM62Q0P6H9 643 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 DENND1CQ8IV53 801 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 CIDECQ96AQ7 238 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 CLIP3Q96DZ5 547 aa19.27■□□□□ 0.67
CACNA1A-257ENST00000638009 TRAFD1O14545 582 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 MAPTP10636 758 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 GRIA1P42261 906 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 UMODL1Q5DID0 1318 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 RXFP2Q8WXD0 754 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 PLEKHA6Q9Y2H5 1048 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 PADI2Q9Y2J8 665 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 MED31Q9Y3C7 131 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 ANGPTL1O95841 491 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 GPIP06744 558 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 TUFMP49411 452 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 LLGL2Q6P1M3 1020 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 DNM1P34Q6PK57 102 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 MTFMTQ96DP5 389 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 PCYT1BQ9Y5K3 369 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 BORCS7-ASMTA0A0B4J1R7 106 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 DNAJA1P31689 397 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 MATKP42679 507 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 ARSKQ6UWY0 536 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 BORCS7Q96B45 105 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 POLD4Q9HCU8 107 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 SLC12A3P55017 1021 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 OR2T34Q8NGX1 318 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 OR2T3Q8NH03 318 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 CBX6O95503 412 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 VLDLRP98155 873 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 AMHR2Q16671 573 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 MAB21L2Q9Y586 359 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 TLE3Q04726 772 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 PTPN11Q06124 597 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 FMR1Q06787 632 aaKnown RBP eCLIP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 FGL1Q08830 312 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 PCBP1Q15365 356 aaKnown RBP eCLIP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 AARDQ4LEZ3 155 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF782Q6ZMW2 699 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 SLC47A2Q86VL8 602 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 ASB12Q8WXK4 309 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 MRPL9Q9BYD2 267 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 FBXL21Q9UKT6 434 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 FADS3Q9Y5Q0 445 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 A0A0J9YVX5 310 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 ILVBLA1L0T0 632 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 BHMG1C9JSJ3 638 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 IFNA1P01562 189 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 PARP6Q2NL67 630 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 FAM47BQ8NA70 645 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 C12orf43Q96C57 262 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 MTMR4Q9NYA4 1195 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF69Q9UC07 566 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 PCDHGC3Q9UN70 934 aa19.26■□□□□ 0.67
CACNA1A-257ENST00000638009 SCN2BO60939 215 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 HTR2AP28223 471 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF565Q8N9K5 539 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 CXorf40AQ8TE69 158 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 TRIM36Q9NQ86 728 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 MAT2BQ9NZL9 334 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 NR2E1Q9Y466 385 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 TKTL1P51854 596 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 NEPROQ6NW34 567 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 MOXD1Q6UVY6 613 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 RBFAQ8N0V3 343 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 NODALQ96S42 347 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms