RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 OGFRQ9NZT2 677 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 SAE1Q9UBE0 346 aaPredicted RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 APPL1Q9UKG1 709 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 TMPRSS11EQ9UL52 423 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 PCDHGA8Q9Y5G5 932 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 HELZ2Q9BYK8 2649 aaKnown RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 CAPN8A6NHC0 703 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 CCDC188H7C350 402 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 PSMD11O00231 422 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 AGRPO00253 132 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 PGRMC1O00264 195 aaKnown RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 CACNB4O00305 520 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 AURKAO14965 403 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 TCEA3O75764 348 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ZRANB2O95218 330 aaKnown RBP eCLIP7.8□□□□□ -1.16
PNKP-229ENST00000637897 JCHAINP01591 159 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 RPLP0P05388 317 aaKnown RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 CTSEP14091 401 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 PECAM1P16284 738 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 ITIH1P19827 911 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 HTR1BP28222 390 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 CSF2RBP32927 897 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ADCY8P40145 1251 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 BLKP51451 505 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 OR1D5P58170 312 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ERVPABLB-1P60509 514 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 POLR2LP62875 67 aaKnown RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 IFI35P80217 286 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 CTBSQ01459 385 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 C2orf54Q08AI8 447 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 CLN3Q13286 438 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 C16orf72Q14CZ0 275 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 PDK2Q15119 407 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 LLGL1Q15334 1064 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 TGIF1Q15583 401 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 PPP2R5EQ16537 467 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 KHDC1Q4VXA5 237 aaKnown RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 C14orf28Q4W4Y0 310 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 PYCR3Q53H96 274 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 RALGPS1Q5JS13 557 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ZNF648Q5T619 568 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 CFAP58Q5T655 872 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ADAMTSL4Q6UY14 1074 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 TAF8Q7Z7C8 310 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 NLRP8Q86W28 1048 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 GKN2Q86XP6 184 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 LRRC49Q8IUZ0 686 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 RASGEF1CQ8N431 466 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ARL14Q8N4G2 192 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 UBL4BQ8N7F7 174 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 Q8N9G6 341 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 KCTD6Q8NC69 237 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 FAM46DQ8NEK8 389 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 NAT6Q93015 286 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 LIN37Q96GY3 246 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 ZNF578Q96N58 590 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 GORASP1Q9BQQ3 440 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ABCG4Q9H172 646 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 CARD9Q9H257 536 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 SEMA6CQ9H3T2 930 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 SUDS3Q9H7L9 328 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 IGSF5Q9NSI5 407 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ZNF446Q9NWS9 450 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 TMEM9Q9P0T7 183 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 TAAR2Q9P1P5 351 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 LCMT1Q9UIC8 334 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 TTC7AQ9ULT0 858 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 PACSIN2Q9UNF0 486 aaPredicted RBP7.8□□□□□ -1.16
PNKP-229ENST00000637897 SDK2Q58EX2 2172 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 COL6A6A6NMZ7 2263 aa7.8□□□□□ -1.16
PNKP-229ENST00000637897 ZNF462Q96JM2 2506 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CCDC66A2RUB6 948 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 A6NCN8 305 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 PRR19A6NJB7 356 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 ZNF487B1APH4 448 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 B4DGG1 531 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 C9orf172C9J069 976 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CEP104O60308 925 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 ECEL1O95672 775 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 IVLP07476 585 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 PIRTP0C851 137 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 KRT10P13645 584 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 GLB1P16278 677 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 DESP17661 470 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 COMTP21964 271 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 TNFRSF8P28908 595 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CD1CP29017 333 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CCKBRP32239 447 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 SERPINB6P35237 376 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 UGT1A5P35504 534 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 ACTN2P35609 894 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CD86P42081 329 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CDKN2BP42772 138 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 SSR1P43307 286 aaKnown RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 GNPDA1P46926 289 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 VSNL1P62760 191 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 WASHC5Q12768 1159 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 NOMO1Q15155 1222 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 HADHQ16836 314 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms