RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 POLR1EQ9GZS1 481 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-250ENST00000637809 GPN2Q9H9Y4 310 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-250ENST00000637809 APMAPQ9HDC9 416 aa12.03□□□□□ -0.48
CACNA1A-250ENST00000637809 SARS2Q9NP81 518 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-250ENST00000637809 VPS18Q9P253 973 aa12.03□□□□□ -0.48
CACNA1A-250ENST00000637809 ANKMY1Q9P2S6 941 aa12.03□□□□□ -0.48
CACNA1A-250ENST00000637809 TMEM184BQ9Y519 407 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-250ENST00000637809 FADS2P1A8MWK0 482 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 MFSD11O43934 449 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 STK17BO94768 372 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 CLDN7O95471 211 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 DLGAP3O95886 979 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 CD48P09326 243 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 SKILP12757 684 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 SERPINB6P35237 376 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 GARSP41250 739 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 ARSEP51690 589 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 DSC2Q02487 901 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 ABHD18Q0P651 414 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 GALNT2Q10471 571 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 UBAP2LQ14157 1087 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 PIGHQ14442 188 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 IGFBP7Q16270 282 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 HENMT1Q5T8I9 393 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 CEACAM20Q6UY09 585 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 RAVER1Q8IY67 606 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 NDUFAF2Q8N183 169 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 ARRDC2Q8TBH0 407 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 NCSTNQ92542 709 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 FATE1Q969F0 183 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 TRIM11Q96F44 468 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 BTBD6Q96KE9 485 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 LYSMD1Q96S90 227 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 ZPBPQ9BS86 351 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 ZNF71Q9NQZ8 489 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 SIDT1Q9NXL6 827 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 RCOR3Q9P2K3 495 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 ZNHIT2Q9UHR6 403 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 ANAPC2Q9UJX6 822 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 KCNK6Q9Y257 313 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 CHKBQ9Y259 395 aa12.02□□□□□ -0.49
CACNA1A-250ENST00000637809 TEX15Q9BXT5 2789 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 MATN3O15232 486 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 ASMTLO95671 621 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 ACP5P13686 325 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 STAT5AP42229 794 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 SPINT3P49223 89 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 EPHB1P54762 984 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 EPHA4P54764 986 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 ITKQ08881 620 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 NIPAL4Q0D2K0 466 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 KLHL30Q0D2K2 578 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 ATP1A1-AS1Q5TC04 95 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 NCBP2-AS2Q69YL0 99 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 CHST15Q7LFX5 561 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 C9orf43Q8TAL5 461 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 STARD8Q92502 1023 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 KIAA1143Q96AT1 154 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 SH3KBP1Q96B97 665 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 HERPUD2Q9BSE4 406 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 ZMYND15Q9H091 742 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 DNPEPQ9ULA0 475 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 NBASA2RRP1 2371 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 NBPF19A0A087WUL8 3843 aa12.01□□□□□ -0.49
CACNA1A-250ENST00000637809 USP9XQ93008 2570 aaPredicted RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 UTP20O75691 2785 aaKnown RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 POLR1CO15160 346 aaPredicted RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 ANKRD34CP0C6C1 535 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 F3P13726 295 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 CES1P23141 567 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 F8A1P23610 371 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 MAN1A1P33908 653 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 RPL26P61254 145 aaKnown RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 UBE2IP63279 158 aaKnown RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 MAP7Q14244 749 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 PAFAH1B3Q15102 231 aaKnown RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 DEFB109BQ30KR1 87 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 CRTC2Q53ET0 693 aaPredicted RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 LYSMD3Q7Z3D4 306 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 SLC9B2Q86UD5 537 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1A-250ENST00000637809 LPCAT1Q8NF37 534 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 APOBEC4Q8WW27 367 aaKnown RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 EID2BQ96D98 161 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 TSGA13Q96PP4 275 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 EFHD1Q9BUP0 239 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 TBC1D10AQ9BXI6 508 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 THAP2Q9H0W7 228 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 RMI1Q9H9A7 625 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 PCDH9Q9HC56 1237 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 RBM22Q9NW64 420 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1A-250ENST00000637809 OGFRQ9NZT2 677 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 CPNE7Q9UBL6 633 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 KLHL3Q9UH77 587 aa12□□□□□ -0.49
CACNA1A-250ENST00000637809 RPL26L1Q9UNX3 145 aaKnown RBP12□□□□□ -0.49
CACNA1A-250ENST00000637809 MRPS18BQ9Y676 258 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms