RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TNFRSF12AQ9NP84 129 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PCDHB1Q9Y5F3 818 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 ACTL7AQ9Y615 435 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 SLC30A1Q9Y6M5 507 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 ANKRD36A6QL64 1941 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 H3BMM5 538 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 ACOT8O14734 319 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 TBL1XO60907 577 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 ECI2O75521 394 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 MATN4O95460 622 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 RPS17P08708 135 aaKnown RBP12.05□□□□□ -0.48
CLN8-212ENST00000637083 IDO1P14902 403 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 VCLP18206 1134 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
CLN8-212ENST00000637083 CACNG1Q06432 222 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 RAB33AQ14088 237 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 PPP1R3AQ16821 1122 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 SFT2D3Q587I9 215 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 COQ5Q5HYK3 327 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 RETSATQ6NUM9 610 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 PCDH20Q8N6Y1 951 aaKnown RBP12.05□□□□□ -0.48
CLN8-212ENST00000637083 EFHBQ8N7U6 833 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 TRAPPC9Q96Q05 1148 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 RNF38Q9H0F5 515 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 MAGEE1Q9HCI5 957 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 GID8Q9NWU2 228 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 FKBPLQ9UIM3 349 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 LSM7Q9UK45 103 aaKnown RBP12.05□□□□□ -0.48
CLN8-212ENST00000637083 PACSIN3Q9UKS6 424 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 RAB26Q9ULW5 256 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 ZNF510Q9Y2H8 683 aa12.05□□□□□ -0.48
CLN8-212ENST00000637083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 EIF4E1BA6NMX2 242 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 BTN3A1O00481 513 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 FBP2O00757 339 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 PIP5K1BO14986 540 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 ANGPT2O15123 496 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 SIX3O95343 332 aaPredicted RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 URODP06132 367 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 LINGO3P0C6S8 592 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 UBTFL6P0CB48 400 aaPredicted RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 UROSP10746 265 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 CD1EP15812 388 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TSPAN8P19075 237 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 CHRM3P20309 590 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 DPP6P42658 865 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 SGSHP51688 502 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 AQP4P55087 323 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 MS4A2Q01362 244 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TWF1Q12792 350 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TRAF2Q12933 501 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 CDH18Q13634 790 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TSNQ15631 228 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 ARMC12Q5T9G4 340 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 IRAK1BP1Q5VVH5 260 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 OR52E8Q6IFG1 317 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 DNAJB7Q7Z6W7 309 aaPredicted RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 CHCHD4Q8N4Q1 142 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 OR56A4Q8NGH8 313 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 FUBP1Q96AE4 644 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 PBXIP1Q96AQ6 731 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TUBGCP3Q96CW5 907 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 PDLIM5Q96HC4 596 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 BIRC8Q96P09 236 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 GBP5Q96PP8 586 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 GPR63Q9BZJ6 419 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TRIM15Q9C019 465 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TMEM45AQ9NWC5 275 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 CNOT11Q9UKZ1 510 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 SUFUQ9UMX1 484 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 A0A0J9YYE9 177 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 PRSS51A0A1B0GVH4 220 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 ATP6AP2A0A1C7CYW4 349 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 C2orf78A6NCI8 922 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 E7ENX8 843 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TRIM24O15164 1050 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 ATP6AP2O75787 350 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 ESRRBO95718 433 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 C8BP07358 591 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 PIM1P11309 404 aaPredicted RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 GPX3P22352 226 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 HMGCLP35914 325 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 MRPL19P49406 292 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 VEGFBP49765 207 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 RHDQ02161 417 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 CREMQ03060 361 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 FOXM1Q08050 763 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 OGFOD2Q6N063 350 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 PSAPL1Q6NUJ1 521 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 PAOXQ6QHF9 649 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLN8-212ENST00000637083 TAS2R42Q7RTR8 314 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 ANKRD33Q7Z3H0 272 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 DEFB128Q7Z7B8 93 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 GPSM1Q86YR5 675 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TCEAL8Q8IYN2 117 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TTC30BQ8N4P2 665 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms