RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TREX1Q9NSU2 369 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 NLE1Q9NVX2 485 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 NSMCE4AQ9NXX6 385 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 SERGEFQ9UGK8 458 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 DMGDHQ9UI17 866 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 RAB21Q9UL25 225 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 CYP8B1Q9UNU6 501 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 SNX24Q9Y343 169 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TEX264Q9Y6I9 313 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 LRP4O75096 1905 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 NUMA1Q14980 2115 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3DA0A087WVF3 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3IA0A087WXS9 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3EA0A087X179 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3KA0A087X1G2 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 A0A1W2PPC4 97 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 CCDC151A5D8V7 595 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3FA6NER0 549 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ANTXRLA6NF34 631 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 AGAP14A8MT82 685 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 METTL12A8MUP2 240 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3LB9A6J9 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 CTIFO43310 598 aaKnown RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 LDB2O43679 373 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 FOXD2O60548 495 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 USP12O75317 370 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ERLIN1O75477 346 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 PCDH8O95206 1070 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ABHD2P08910 425 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 GSTM1P09488 218 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ALPIP09923 528 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 RHOXF2BP0C7M4 288 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3HP0C7X1 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 SP9P0CG40 484 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ITGALP20701 1170 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 KELP23276 732 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 CD27P26842 260 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 AKT2P31751 481 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ACSL1P33121 698 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 PHBP35232 272 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 LIG3P49916 1009 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TERF1P54274 439 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 PLTPP55058 493 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 KIAA1024LP59773 190 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 YPEL5P62699 121 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 PRAMEP78395 509 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 SLC7A5Q01650 507 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 GSTM4Q03013 218 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 SGCGQ13326 291 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ITIH4Q14624 930 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 POU6F1Q14863 301 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 RNF187Q5TA31 235 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ANKRD22Q5VYY1 191 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 STEAP4Q687X5 459 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3GQ6DHY5 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3CQ6IPX1 549 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 KYAT3Q6YP21 454 aaKnown RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 KIAA0408Q6ZU52 694 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TRMT10CQ7L0Y3 403 aaKnown RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TECPR1Q7Z6L1 1165 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 PRUNE1Q86TP1 453 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBC1D3Q8IZP1 549 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 SLC25A41Q8N5S1 370 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 DNASE2BQ8WZ79 361 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 SIGLEC10Q96LC7 697 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TBATAQ96M53 351 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 TCF12Q99081 682 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 RHOXF2Q9BQY4 288 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 FAM167BQ9BTA0 163 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 FUT8Q9BYC5 575 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 EPC1Q9H2F5 836 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ANKZF1Q9H8Y5 726 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 RRAGDQ9NQL2 400 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 VPS18Q9P253 973 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 CORO1CQ9ULV4 474 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-205ENST00000636792 PCDHGA5Q9Y5G8 931 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 HS3ST3A1Q9Y663 406 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 FAM169AQ9Y6X4 670 aa6.69□□□□□ -1.34
UPF3B-205ENST00000636792 ELOA3CA0A087WX78 387 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 TRBV5-4A0A0C4DH59 114 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 GLYATL1P3A0A0U1RQE8 302 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 A0A1W2PNR3 127 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 A0A1W2PQU0 124 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 TCRBV7S3A2A0A539 114 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ELOA3DA6NLF2 546 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 A6NNZ2 444 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 MEI4A8MW99 385 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 F5H423 210 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 FPGTO14772 594 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 LZTS3O60299 673 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 RECQL5O94762 991 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CLDN7O95471 211 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 C1SP09871 688 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CTPS1P17812 591 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 OGNP20774 298 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 MGAT1P26572 445 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ECHS1P30084 290 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms