RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TBC1D21Q8IYX1 336 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 POU5F2Q8N7G0 328 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 METTL2AQ96IZ6 378 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 DNAJC1Q96KC8 554 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 UBXN10Q96LJ8 280 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CRYL1Q9Y2S2 319 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 GLYATL1P3A0A0U1RQE8 302 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SNAP91O60641 907 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SLC22A3O75751 556 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 GLUD1P00367 558 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 IFNA14P01570 189 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 RPN2P04844 631 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 HNMTP50135 292 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PPIGQ13427 754 aaKnown RBP eCLIP4.53□□□□□ -1.688e-7■■■□□ 15.7
SCN1A-210ENST00000635776 DLG2Q15700 870 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 DPY30Q9C005 99 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TRIM45Q9H8W5 580 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 RNF186Q9NXI6 227 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 DLGAP2Q9P1A6 1054 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 H3BNX3 289 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 RECQL5O94762 991 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 HNRNPA1P09651 372 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 HGFP14210 728 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ITGAXP20702 1163 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 RPL5P46777 297 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ELP6Q0PNE2 266 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 BIRC2Q13490 618 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PDCD4Q53EL6 469 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PAGE2BQ5JRK9 111 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 GPR158Q5T848 1215 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 BRAT1Q6PJG6 821 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 MAGED4Q96JG8 741 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF514Q96K75 400 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 INSL5Q9Y5Q6 135 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 MICAL3Q7RTP6 2002 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CCDC162PA2VCL2 907 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PIAS1O75925 651 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CD1DP15813 335 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CACNA2D1P54289 1103 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 DNAJB7Q7Z6W7 309 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 OR2AP1Q8NGE2 309 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PNPT1Q8TCS8 783 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TWIST2Q8WVJ9 160 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ISG20Q96AZ6 181 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TMEM159Q96B96 161 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CASD1Q96PB1 797 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 THG1LQ9NWX6 298 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TMED5Q9Y3A6 229 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 MFHAS1Q9Y4C4 1052 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 NME7Q9Y5B8 376 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SLC4A7Q9Y6M7 1214 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 COMMD3-BMI1R4GMX3 469 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 WDR90Q96KV7 1748 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ITM2AO43736 263 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 BCAS2O75934 225 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 IGHA2P01877 340 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 IL6P05231 212 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 IFNA8P32881 189 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 FAM98BQ52LJ0 330 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ALFQ53S48 1182 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TMTC4Q5T4D3 741 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PDE12Q6L8Q7 609 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SLC30A9Q6PML9 568 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SORT1Q99523 831 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 YTHDF1Q9BYJ9 559 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 GPR62Q9BZJ7 368 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ANAPC2Q9UJX6 822 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PCDHB9Q9Y5E1 797 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 FAM234BA2RU67 622 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 MROH6A6NGR9 719 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 J3KR12 359 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TBC1D4O60343 1298 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PDHA1P08559 390 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 EEF1DP29692 281 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ANXA11P50995 505 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CHN2P52757 468 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 RAD23AP54725 363 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 RHDQ02161 417 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 NR6A1Q15406 480 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TTC23Q5W5X9 447 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 DENND5AQ6IQ26 1287 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ERICH5Q6P6B1 374 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CNSTQ6PJW8 725 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 RNF19BQ6ZMZ0 732 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 LRRC70Q7Z2Q7 622 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 FAM126BQ8IXS8 530 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 KDM1BQ8NB78 822 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ASZ1Q8WWH4 475 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 MIEF2Q96C03 454 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 C12orf65Q9H3J6 166 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PIDD1Q9HB75 910 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PARVBQ9HBI1 364 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 AHSPQ9NZD4 102 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CCDC167Q9P0B6 97 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ATP11BQ9Y2G3 1177 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 COPG1Q9Y678 874 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 A0A0J9YYE9 177 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 MEIS3P2A8K0S8 358 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PER2O15055 1255 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CXCL10P02778 98 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms