RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 VPS33AQ96AX1 596 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 RMDN1Q96DB5 314 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 CDKN2AIPNLQ96HQ2 116 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 FUBP3Q96I24 572 aaKnown RBP eCLIP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 KCTD14Q9BQ13 255 aaPredicted RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 ADI1Q9BV57 179 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 LIN28AQ9H9Z2 209 aaKnown RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 AGPAT4Q9NRZ5 378 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 INTS10Q9NVR2 710 aaKnown RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 SMOXQ9NWM0 555 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 NOD1Q9Y239 953 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 PRG3Q9Y2Y8 225 aaPredicted RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 PTPRDP23468 1912 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 hCG_2014768A0A024R1R8 64 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 A0A087WXM4 84 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 A0A1B0GTL3 188 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 CCDC154A6NI56 674 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 SYCE1LA8MT33 242 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 FXYD1O00168 92 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 PRAMEF11O60813 436 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 ECI2O75521 394 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 SOAT2O75908 522 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 BMP10O95393 424 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 OXTRP30559 389 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 APLP1P51693 650 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 YBEYP58557 167 aaPredicted RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 FOXM1Q08050 763 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 MERTKQ12866 999 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 TSNQ15631 228 aaKnown RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 SCIMPQ6UWF3 145 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 GLB1LQ6UWU2 654 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 SPATA19Q7Z5L4 167 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 GPR141Q7Z602 305 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 EPHX4Q8IUS5 362 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 ERI1Q8IV48 349 aaKnown RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 CMTR2Q8IYT2 770 aaKnown RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 MFSD2AQ8NA29 543 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 DRAXINQ8NBI3 349 aaPredicted RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 ATAD1Q8NBU5 361 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 TNIP2Q8NFZ5 429 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 TRIM54Q9BYV2 358 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 DERL2Q9GZP9 239 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 ALG2Q9H553 416 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 OLA1Q9NTK5 396 aaKnown RBP10.65□□□□□ -0.7
PSPC1-207ENST00000635251 HSFX1Q9UBD0 423 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 OAZ3Q9UMX2 235 aa10.65□□□□□ -0.7
PSPC1-207ENST00000635251 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.71
PSPC1-207ENST00000635251 NPEPPSL1A6NEC2 478 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 DRGXA6NNA5 263 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 CDC7O00311 574 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 BTN3A1O00481 513 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 B4GALT3O60512 393 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 SNX2O60749 519 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 NDST3O95803 873 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 CYBBP04839 570 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 GNAO1P09471 354 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 CDK4P11802 303 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 FCGR1AP12314 374 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 NCK1P16333 377 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 ARL1P40616 181 aaPredicted RBP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 MAPKAPK2P49137 400 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 YBX1P67809 324 aaKnown RBP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 KCTD21Q4G0X4 260 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 RABL3Q5HYI8 236 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 COQ5Q5HYK3 327 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 GLT6D1Q7Z4J2 308 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 ADGRG5Q8IZF4 528 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 LGI2Q8N0V4 545 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 CFAP52Q8N1V2 620 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 TTC9BQ8N6N2 239 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 CENPNQ96H22 339 aaPredicted RBP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 MYRFLQ96LU7 910 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 C1orf50Q9BV19 199 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 TLR8Q9NR97 1041 aaKnown RBP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 SUN2Q9UH99 717 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 PCDHA9Q9Y5H5 950 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 A0A1W2PP18 115 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 OAZ2O95190 189 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 EPOP01588 193 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 PYGLP06737 847 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 GPIP06744 558 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 MYF6P23409 242 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 GSK3BP49841 420 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 LIPEQ05469 1076 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 TAF10Q12962 218 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 DCTN2Q13561 401 aaKnown RBP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 ATP6AP1Q15904 470 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 TYSND1Q2T9J0 566 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 CTXN3Q4LDR2 81 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 TMTC4Q5T4D3 741 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 AFTPHQ6ULP2 937 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 EFL1Q7Z2Z2 1120 aaKnown RBP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 CLVS1Q8IUQ0 354 aaPredicted RBP10.64□□□□□ -0.71
PSPC1-207ENST00000635251 GOLM1Q8NBJ4 401 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 TRPV3Q8NET8 790 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 OR4K2Q8NGD2 314 aa10.64□□□□□ -0.71
PSPC1-207ENST00000635251 TMEM125Q96AQ2 219 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms