RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 NOL9Q5SY16 702 aaKnown RBP11.32□□□□□ -0.6
SRSF4-208ENST00000634348 C6orf52Q5T4I8 152 aa11.32□□□□□ -0.6
SRSF4-208ENST00000634348 AADACL2Q6P093 401 aa11.32□□□□□ -0.6
SRSF4-208ENST00000634348 ZC3H7AQ8IWR0 971 aaKnown RBP11.32□□□□□ -0.6
SRSF4-208ENST00000634348 PHTF2Q8N3S3 785 aa11.32□□□□□ -0.6
SRSF4-208ENST00000634348 FNDC11Q9BVV2 318 aa11.32□□□□□ -0.6
SRSF4-208ENST00000634348 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
SRSF4-208ENST00000634348 ELAC1Q9H777 363 aaKnown RBP11.32□□□□□ -0.6
SRSF4-208ENST00000634348 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
SRSF4-208ENST00000634348 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 C19orf81C9J6K1 198 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ITGA2BP08514 1039 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 CYP3A4P08684 503 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 CKBP12277 381 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 RAB3BP20337 219 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ZNF81P51508 661 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ZNF470Q6ECI4 717 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ACTRT1Q8TDG2 376 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 DDX1Q92499 740 aaKnown RBP11.31□□□□□ -0.6
SRSF4-208ENST00000634348 PREBQ9HCU5 417 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 EFCAB9A8MZ26 197 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 FARS2O95363 451 aaKnown RBP11.31□□□□□ -0.6
SRSF4-208ENST00000634348 MTHFD1P11586 935 aaKnown RBP11.31□□□□□ -0.6
SRSF4-208ENST00000634348 S100A10P60903 97 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 PRKCDQ05655 676 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 DYRK1AQ13627 763 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 COL28A1Q2UY09 1125 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 DDX43Q9NXZ2 648 aaKnown RBP11.31□□□□□ -0.6
SRSF4-208ENST00000634348 NRP2O60462 931 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 COX7A2P14406 83 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ACSL1P33121 698 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 MAGEA3P43357 314 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 MTX3Q5HYI7 312 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ALG10BQ5I7T1 473 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 TRAPPC12Q8WVT3 735 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 LCHNA4D1U4 455 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 WDPCPO95876 746 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 CYP2A7P20853 494 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 NFIAQ12857 509 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 TIGD3Q6B0B8 471 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 GCNT7Q6ZNI0 430 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ZNF550Q7Z398 422 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 BTN3A1O00481 513 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 HSPA12AO43301 675 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 AKAP3O75969 853 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 PPP1R26Q5T8A7 1209 aaPredicted RBP11.31□□□□□ -0.6
SRSF4-208ENST00000634348 HID1Q8IV36 788 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 SDR16C5Q8N3Y7 309 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 FAM98AQ8NCA5 519 aaKnown RBP11.31□□□□□ -0.6
SRSF4-208ENST00000634348 FAM86C2PA6NEL3 165 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 CSH1P0DML2 217 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 CSH2P0DML3 217 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 SLC2A3P11169 496 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 JUNDP17535 347 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 GRIA1P42261 906 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 MXD1Q05195 221 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 SLC22A16Q86VW1 577 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 PLEKHM1Q9Y4G2 1056 aa11.31□□□□□ -0.6
SRSF4-208ENST00000634348 PET100P0DJ07 73 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.61e-6■■□□□ 14.2
SRSF4-208ENST00000634348 ZNF674Q2M3X9 581 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 SYT12Q8IV01 421 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 KATNAL2Q8IYT4 538 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 BRSK1Q8TDC3 778 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 SYN2Q92777 582 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-208ENST00000634348 RELTQ969Z4 430 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 ERGIC2Q96RQ1 377 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 CNPPD1Q9BV87 410 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 NMRAL1Q9HBL8 299 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 C1orf109Q9NX04 203 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 ZNF214Q9UL59 606 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-208ENST00000634348 NPHP4O75161 1426 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-208ENST00000634348 INPPL1O15357 1258 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 EPCAMP16422 314 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 GNB3P16520 340 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 ETV5P41161 510 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 OR3A3P47888 321 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 OR3A2P47893 321 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 CDH11P55287 796 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 SMIM15Q7Z3B0 74 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 KCNMB4Q86W47 210 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 NETO2Q8NC67 525 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 MCOLN3Q8TDD5 553 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 ZNF226Q9NYT6 803 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 M0R129 80 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 TULP2O00295 520 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 CCNYL3P0C7X3 344 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 BCAT1P54687 386 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 TLR1Q15399 786 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 MARC1Q5VT66 337 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 ZC3HC1Q86WB0 502 aaKnown RBP11.3□□□□□ -0.6
SRSF4-208ENST00000634348 ZNF709Q8N972 641 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 TMEM203Q969S6 136 aa11.3□□□□□ -0.6
SRSF4-208ENST00000634348 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms