RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TTC1Q99614 292 aa21.93■■□□□ 1.1
PNKP-220ENST00000627232 RNPEPL1Q9HAU8 725 aa21.93■■□□□ 1.1
PNKP-220ENST00000627232 SPHK2Q9NRA0 654 aa21.93■■□□□ 1.1
PNKP-220ENST00000627232 ZDHHC7Q9NXF8 308 aa21.93■■□□□ 1.1
PNKP-220ENST00000627232 PPIL1Q9Y3C6 166 aa21.93■■□□□ 1.1
PNKP-220ENST00000627232 C1orf232A0A0U1RR37 186 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 OR1I1O60431 355 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 SUPT7LO94864 414 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 PABPC1P11940 636 aaKnown RBP21.92■■□□□ 1.1
PNKP-220ENST00000627232 EZRP15311 586 aaKnown RBP21.92■■□□□ 1.1
PNKP-220ENST00000627232 EPCAMP16422 314 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 HNF1BP35680 557 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 PDE12Q6L8Q7 609 aaKnown RBP21.92■■□□□ 1.1
PNKP-220ENST00000627232 ELMSAN1Q6PJG2 1045 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 SNX20Q7Z614 316 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 SCUBE1Q8IWY4 988 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 POU5F2Q8N7G0 328 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 PAF1Q8N7H5 531 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 ENDOVQ8N8Q3 282 aaKnown RBP21.92■■□□□ 1.1
PNKP-220ENST00000627232 ACTRT2Q8TDY3 377 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 ECHDC3Q96DC8 303 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 BBS2Q9BXC9 721 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 OSBPL1AQ9BXW6 950 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 MEAF6Q9HAF1 191 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 DPP7Q9UHL4 492 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 RNF112Q9ULX5 631 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 MYOFQ9NZM1 2061 aa21.92■■□□□ 1.1
PNKP-220ENST00000627232 TRBV5-4A0A0C4DH59 114 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 A0A1W2PQ67 120 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 TMEM233B4DJY2 109 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 UBXN8O00124 270 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 ZNF197O14709 1029 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 PRMT5O14744 637 aaPredicted RBP21.91■■□□□ 1.1
PNKP-220ENST00000627232 NIPSNAP2O75323 286 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 THRAP10827 490 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 GM2AP17900 193 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 EN2P19622 333 aaPredicted RBP21.91■■□□□ 1.1
PNKP-220ENST00000627232 GKP32189 559 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 STK19P49842 368 aaPredicted RBP21.91■■□□□ 1.1
PNKP-220ENST00000627232 CAMK1Q14012 370 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 HERC3Q15034 1050 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 CARD16Q5EG05 197 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 ASTLQ6HA08 431 aaPredicted RBP21.91■■□□□ 1.1
PNKP-220ENST00000627232 GRAMD4Q6IC98 578 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 PLPP6Q8IY26 295 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 CD200R1Q8TD46 325 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 VOPP1Q96AW1 172 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 RPL10LQ96L21 214 aaKnown RBP21.91■■□□□ 1.1
PNKP-220ENST00000627232 RTKNQ9BST9 563 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 MARK1Q9P0L2 795 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 HECAQ9UBI9 543 aaPredicted RBP21.91■■□□□ 1.1
PNKP-220ENST00000627232 TRAF6Q9Y4K3 522 aa21.91■■□□□ 1.1
PNKP-220ENST00000627232 A0A0U1RQS6 177 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 E5RI56 91 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 NEDD8-MDP1E9PL57 170 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 GAPDHSO14556 408 aaPredicted RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 KLK8O60259 260 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 POP4O95707 220 aaKnown RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 JUNP05412 331 aaKnown RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 ZNF7P17097 686 aaPredicted RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 ITGALP20701 1170 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 PIK3R1P27986 724 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 IRS1P35568 1242 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 IL2P60568 153 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 BTKQ06187 659 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 NXNQ6DKJ4 435 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 NET1Q7Z628 596 aaPredicted RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 KIAA0907Q7Z7F0 614 aaPredicted RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 EXT2Q93063 718 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 FAM136AQ96C01 138 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 PDLIM5Q96HC4 596 aaKnown RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 FAM161BQ96MY7 647 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 ZNF641Q96N77 438 aaPredicted RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 SLC2A11Q9BYW1 496 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 SUV39H2Q9H5I1 410 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 DCLRE1BQ9H816 532 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 GALPQ9UBC7 116 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 FNDC3AQ9Y2H6 1198 aaKnown RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 RGSL1A5PLK6 1076 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 STX16-NPEPL1H3BU86 382 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 STX16O14662 325 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 SLC9A3R1O14745 358 aaPredicted RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 CIB2O75838 187 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 CLDN7O95471 211 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 PRAMEF1O95521 474 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 TSPAN12O95859 305 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 FGF4P08620 206 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 GFAPP14136 432 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 ECT2LQ008S8 904 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 GPR33Q49SQ1 333 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 C6orf163Q5TEZ5 329 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 TPRG1Q6ZUI0 275 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 SERPINA9Q86WD7 417 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 ULK2Q8IYT8 1036 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 C7orf61Q8IZ16 206 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 RBFAQ8N0V3 343 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 FBXO39Q8N4B4 442 aa21.9■■□□□ 1.1
PNKP-220ENST00000627232 SIDT2Q8NBJ9 832 aaKnown RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 RP9Q8TA86 221 aaKnown RBP21.9■■□□□ 1.1
PNKP-220ENST00000627232 PPP1R36Q96LQ0 422 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms