RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ITGA9Q13797 1035 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 SEMA3AQ14563 771 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 SMAD2Q15796 467 aaKnown RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CHRNA6Q15825 494 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 FAM83EQ2M2I3 478 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 LEXMQ3ZCV2 418 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF789Q5FWF6 425 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 TMEM196Q5HYL7 178 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 PPM1JQ5JR12 505 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 RBM20Q5T481 1227 aaKnown RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 N4BP2L1Q5TBK1 243 aaPredicted RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 AGAP9Q5VTM2 703 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 PSAPL1Q6NUJ1 521 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 UGT3A1Q6NUS8 523 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 KLC3Q6P597 504 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 FBXL19Q6PCT2 694 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 FAM151BQ6UXP7 276 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CDHR3Q6ZTQ4 885 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ERN2Q76MJ5 926 aaKnown RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 PARS2Q7L3T8 475 aaKnown RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CLEC14AQ86T13 490 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 PIANPQ8IYJ0 282 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CHPFQ8IZ52 775 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 NRSN1Q8IZ57 195 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 RBFAQ8N0V3 343 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CCDC63Q8NA47 563 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 GPR26Q8NDV2 337 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ARMC2Q8NEN0 867 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ACVR1CQ8NER5 493 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 RDH11Q8TC12 318 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF398Q8TD17 642 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 LRRC8CQ8TDW0 803 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 SREK1Q8WXA9 508 aaKnown RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ARRDC3Q96B67 414 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 NECAB3Q96P71 396 aaPredicted RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF317Q96PQ6 595 aaPredicted RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 FAM129BQ96TA1 746 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 NDNQ99608 321 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 LRFN3Q9BTN0 628 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 HDAC8Q9BY41 377 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CLPBQ9H078 707 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 ASB8Q9H765 288 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 FBRSL1Q9HCM7 1045 aaKnown RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 TAS2R13Q9NYV9 303 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 NFKBIL1Q9UBC1 381 aaPredicted RBP7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CRLS1Q9UJA2 301 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 SARDHQ9UL12 918 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 HCN2Q9UL51 889 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 CRYL1Q9Y2S2 319 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 PIAS3Q9Y6X2 628 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 DOCK6Q96HP0 2047 aa7.5□□□□□ -1.21
PTP4A1-206ENST00000627002 A0A0U1RQS6 177 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 AGAP14A8MT82 685 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 TCP11X1B4DZS4 312 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 F8W8V4 182 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 GAPDHSO14556 408 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 NDUFAB1O14561 156 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 PRMT5O14744 637 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 KLF11O14901 512 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 PHGDHO43175 533 aaKnown RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 VPS26AO75436 327 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 RHOBTB1O94844 696 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 KLHL2O95198 593 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 FAM107AO95990 144 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 PROCP04070 461 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 LTA4HP09960 611 aaKnown RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 PRSS56P0CW18 603 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 SRFP11831 508 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 PKMP14618 531 aaKnown RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 NTSR1P30989 418 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 FMO4P31512 558 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 SKIV2L2P42285 1042 aaKnown RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 PSMD8P48556 350 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 CDKN1CP49918 316 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 CDKN2DP55273 166 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 SEC13P55735 322 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 MRPS21P82921 87 aaKnown RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 IRF9Q00978 393 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 RALGDSQ12967 914 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 ITIH4Q14624 930 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 STARD3Q14849 445 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 PON2Q15165 354 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF284Q2VY69 593 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 POM121L1PQ3SYA9 428 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 HSF5Q4G112 596 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 FBXO43Q4G163 708 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 TMEM52BQ4KMG9 183 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 LRRC73Q5JTD7 316 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 ATG16L1Q676U5 607 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF776Q68DI1 518 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF549Q6P9A3 640 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 TXNDC11Q6PKC3 985 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 LIPIQ6XZB0 460 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 CPLX4Q7Z7G2 160 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 SERPINA9Q86WD7 417 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 MMAAQ8IVH4 418 aaKnown RBP7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 CEP97Q8IW35 865 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 NXPE1Q8N323 547 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 TRAM1L1Q8N609 369 aa7.49□□□□□ -1.21
PTP4A1-206ENST00000627002 BCAS4Q8TDM0 211 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms