RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 ZBED3Q96IU2 234 aaPredicted RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 FAM227BQ96M60 508 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 CAMK1GQ96NX5 476 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 LMF1Q96S06 567 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 ZNF347Q96SE7 839 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 UHRF1Q96T88 793 aaPredicted RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 P2RX7Q99572 595 aaKnown RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 C19orf43Q9BQ61 176 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 LRFN3Q9BTN0 628 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 LRRC1Q9BTT6 524 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 FOXQ1Q9C009 403 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 ISCUQ9H1K1 167 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 TTYH1Q9H313 450 aaPredicted RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 C11orf49Q9H6J7 331 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 TDRD3Q9H7E2 651 aaKnown RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 MLXIPLQ9NP71 852 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 ING3Q9NXR8 418 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 CCDC59Q9P031 241 aaKnown RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 LRP2BPQ9P2M1 347 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 CNOT8Q9UFF9 292 aaKnown RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 FAM153AQ9UHL3 310 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 ACTL7BQ9Y614 415 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 UTYO14607 1347 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 MN1Q10571 1320 aaPredicted RBP8.31□□□□□ -1.08
SMN2-214ENST00000626847 ADGRA3Q8IWK6 1321 aa8.31□□□□□ -1.08
SMN2-214ENST00000626847 CENPXA8MT69 81 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 NT5C1B-RDH14C9J2C7 533 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 TFECO14948 347 aaPredicted RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 ARHGEF9O43307 516 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 THAP12O43422 761 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 CST8O60676 142 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 CBR3O75828 277 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 CST3P01034 146 aaPredicted RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 IFNA4P05014 189 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SLC3A2P08195 630 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 SRGAP2CP0DJJ0 459 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SAGP10523 405 aaPredicted RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 IL1R1P14778 569 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 CYP11B1P15538 503 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 MAPK3P27361 379 aaPredicted RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 SYKP43405 635 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 HNMTP50135 292 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 P2RY4P51582 365 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 PGDP52209 483 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SNRPNP63162 240 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 RPP30P78346 268 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 ASIC1P78348 528 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 DSC2Q02487 901 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 DLG1Q12959 904 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 STX5Q13190 355 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 DDX39BQ13838 428 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 TRIM25Q14258 630 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 SLBPQ14493 270 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMN2-214ENST00000626847 PTPRRQ15256 657 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 ALG11Q2TAA5 492 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 NBPF12Q5TAG4 269 aaPredicted RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 HEATR6Q6AI08 1181 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 GPR139Q6DWJ6 353 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 UGT3A1Q6NUS8 523 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 RAD9BQ6WBX8 426 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SPOCD1Q6ZMY3 1216 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 RFX8Q6ZV50 586 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 FKBP9P1Q75LS8 142 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 KCNK18Q7Z418 384 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 GALNTL5Q7Z4T8 443 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 PRSS42Q7Z5A4 293 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 STRA8Q7Z7C7 330 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 DGKHQ86XP1 1220 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 ZDHHC17Q8IUH5 632 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 HERC6Q8IVU3 1022 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 THNSL1Q8IYQ7 743 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 NRSN1Q8IZ57 195 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SYCE1Q8N0S2 351 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 CPA6Q8N4T0 437 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 FAM26EQ8N5C1 309 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SRBD1Q8N5C6 995 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 ZNF366Q8N895 744 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 MCPH1Q8NEM0 835 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 ADCY4Q8NFM4 1077 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 TBC1D15Q8TC07 691 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 HDAC2Q92769 488 aaKnown RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 CPNE4Q96A23 557 aaPredicted RBP8.3□□□□□ -1.08
SMN2-214ENST00000626847 RIPOR3Q96MK2 946 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SERPINB11Q96P15 392 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 LRRC37BQ96QE4 947 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 PIGSQ96S52 555 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 BTBD10Q9BSF8 475 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 ZNF416Q9BWM5 594 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 KRTAP4-2Q9BYR5 136 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 USP44Q9H0E7 712 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 LRRC40Q9H9A6 602 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 HMG20AQ9NP66 347 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 CPA4Q9UI42 421 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 SNX12Q9UMY4 172 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 HYOU1Q9Y4L1 999 aa8.3□□□□□ -1.08
SMN2-214ENST00000626847 ADGRA2Q96PE1 1338 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms