RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ARL10Q8N8L6 244 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 AVL9Q8NBF6 648 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 GPR26Q8NDV2 337 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 HEXDCQ8WVB3 486 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 PEX13Q92968 403 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 APOLD1Q96LR9 279 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 SMIM14Q96QK8 99 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 OR2M4Q96R27 311 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 NAPGQ99747 312 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 GORASP1Q9BQQ3 440 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 BOCQ9BWV1 1114 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 LGR4Q9BXB1 951 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 SMOXQ9NWM0 555 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 ANGPTL2Q9UKU9 493 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 SCN8AQ9UQD0 1980 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 ARID1BQ8NFD5 2236 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 TRIM38O00635 465 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 YY2O15391 372 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 KCNJ13O60928 360 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 APRTP07741 180 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 SLC2A4P14672 509 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 VCLP18206 1134 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 ACADVLP49748 655 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 GTF2H3Q13889 308 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 ALS2CLQ60I27 953 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 PPP1R21Q6ZMI0 780 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 TAF8Q7Z7C8 310 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 CACTIN-AS1Q8N1I8 211 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 PRELID2Q8N945 189 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 DNAAF3Q8N9W5 541 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 GPBAR1Q8TDU6 330 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 MAGOHBQ96A72 148 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 ULK4Q96C45 1275 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 EID2BQ96D98 161 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 ZNF514Q96K75 400 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 TTC25Q96NG3 672 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 WDR24Q96S15 920 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 SUFUQ9UMX1 484 aa13.89□□□□□ -0.19
SNRPA1-216ENST00000626000 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 HEATR9A2RTY3 570 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 FADS2P1A8MWK0 482 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 INPP4BO15327 924 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 GIMD1P0DJR0 217 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 RALBP11234 206 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 PAFAH1B1P43034 410 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 GNPDA1P46926 289 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 SKIDA1Q1XH10 827 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 DEFB133Q30KQ1 61 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 GPR33Q49SQ1 333 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 PYCR3Q53H96 274 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 DENND5AQ6IQ26 1287 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 KDM7AQ6ZMT4 941 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 RFLNAQ6ZTI6 216 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 RAB44Q7Z6P3 723 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 TMPRSS12Q86WS5 348 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 PELI3Q8N2H9 469 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 STYXQ8WUJ0 223 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 APOL2Q9BQE5 337 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 CLPBQ9H078 707 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 ETNK1Q9HBU6 452 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 IL26Q9NPH9 171 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 RIMKLBQ9ULI2 386 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 PYCARDQ9ULZ3 195 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 GPR34Q9UPC5 381 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 NEUROG3Q9Y4Z2 214 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 SAR1BQ9Y6B6 198 aa13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 ZNF106Q9H2Y7 1883 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-216ENST00000626000 DNAH14Q0VDD8 3507 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 SPTBN2O15020 2390 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 A0A0U1RQS6 177 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 EME2A4GXA9 379 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 F8W8V4 182 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 H7C0S8 307 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 AURKAO14965 403 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 NUAK1O60285 661 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 PHF2O75151 1096 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 USP12O75317 370 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 PRAMEF1O95521 474 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 ITGALP20701 1170 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 RPL22P35268 128 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 ADCY8P40145 1251 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 ZNF140P52738 457 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 BASP1P80723 227 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 FOXC1Q12948 553 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 C1orf61Q13536 156 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 CCDC137Q6PK04 289 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 DOK6Q6PKX4 331 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 FAM46DQ8NEK8 389 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 DDHD1Q8NEL9 900 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 GDAP1Q8TB36 358 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 PTCD2Q8WV60 388 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 GRAMD1AQ96CP6 724 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 RANBP9Q96S59 729 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 AGAP2Q99490 1192 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 TTC1Q99614 292 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 TMEM168Q9H0V1 697 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 TCEAL2Q9H3H9 227 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 BPIFA1Q9NP55 256 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 MRPL40Q9NQ50 206 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms