RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 CEP295NLQ96MC4 621 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 GCNAQ96QF7 691 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 KLHL4Q9C0H6 718 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 ARHGEF38Q9NXL2 777 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 MARCH4Q9P2E8 410 aaPredicted RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 UBA2Q9UBT2 640 aaPredicted RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 LOC102723996A0A087X1L8 192 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 LRRC72A6NJI9 287 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 TCERG1O14776 1098 aaKnown RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 C21orf33P30042 268 aaPredicted RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 BDKRB2P30411 391 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 HOXA11P31270 313 aaPredicted RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 STAT2P52630 851 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 CSNK2A1P68400 391 aaPredicted RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 BNC1Q01954 994 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 CALD1Q05682 793 aaKnown RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 GRSF1Q12849 480 aaKnown RBP eCLIP4.09□□□□□ -1.75
CDR1-202ENST00000625883 TRAF3Q13114 568 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 GRAPQ13588 217 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 BAATQ14032 418 aaPredicted RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 RASA2Q15283 850 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 AMZ1Q400G9 498 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 TDRD12Q587J7 1177 aaKnown RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 LCN10Q6JVE6 187 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 C8orf82Q6P1X6 216 aaPredicted RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 KCTD18Q6PI47 426 aaPredicted RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 ARID3BQ8IVW6 561 aaPredicted RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 MCEMP1Q8IX19 187 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 PCDH20Q8N6Y1 951 aaKnown RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 KCTD6Q8NC69 237 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 CCDC191Q8NCU4 936 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 CSNK2A3Q8NEV1 391 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 ORAI1Q96D31 301 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 KXD1Q9BQD3 176 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 SLC25A33Q9BSK2 321 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 MMTAG2Q9BU76 263 aaKnown RBP4.09□□□□□ -1.75
CDR1-202ENST00000625883 KIFC3Q9BVG8 833 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 DNAJB4Q9UDY4 337 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 STK39Q9UEW8 545 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 PADI3Q9ULW8 664 aa4.09□□□□□ -1.75
CDR1-202ENST00000625883 ZNF644Q9H582 1327 aaPredicted RBP4.08□□□□□ -1.76
CDR1-202ENST00000625883 hDV102S1A0JD36 115 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 LINC01553A4QN01 128 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 UBE2CO00762 179 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 SPINT2O43291 252 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 PLPP2O43688 288 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 ZNF500O60304 480 aaPredicted RBP4.08□□□□□ -1.76
CDR1-202ENST00000625883 CRYABP02511 175 aaKnown RBP4.08□□□□□ -1.76
CDR1-202ENST00000625883 PRLRP16471 622 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 ITGB8P26012 769 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 FASLGP48023 281 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 PPP5CP53041 499 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 PGGT1BP53609 377 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 TNFAIP1Q13829 316 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 DHX34Q14147 1143 aaKnown RBP4.08□□□□□ -1.76
CDR1-202ENST00000625883 DECR1Q16698 335 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 TMEM266Q2M3C6 531 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 SETMARQ53H47 684 aaPredicted RBP4.08□□□□□ -1.76
CDR1-202ENST00000625883 DCST1Q5T197 706 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 ATG9AQ7Z3C6 839 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 RASGEF1CQ8N431 466 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 MINDY1Q8N5J2 469 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 OR14A16Q8NHC5 309 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 HMGCLL1Q8TB92 370 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 WFIKKN2Q8TEU8 576 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 TAAR8Q969N4 342 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 TMCO6Q96DC7 493 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 NUDCD1Q96RS6 583 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 APOL6Q9BWW8 343 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 OSGEPL1Q9H4B0 414 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 C1RLQ9NZP8 487 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 CPSF2Q9P2I0 782 aaKnown RBP4.08□□□□□ -1.76
CDR1-202ENST00000625883 RNF7Q9UBF6 113 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 ZNF711Q9Y462 761 aa4.08□□□□□ -1.76
CDR1-202ENST00000625883 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.08□□□□□ -1.76
CDR1-202ENST00000625883 A0A0U1RQJ8 604 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 CLEC18AA5D8T8 446 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 TMEM8BA6NDV4 472 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 EIF4E1BA6NMX2 242 aaKnown RBP4.07□□□□□ -1.76
CDR1-202ENST00000625883 AVILO75366 819 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 SERPINI2O75830 405 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 SSTR2P30874 369 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 BRWD1-AS2P59051 145 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
CDR1-202ENST00000625883 TMF1P82094 1093 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 FOXM1Q08050 763 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 MAD2L1Q13257 205 aaPredicted RBP4.07□□□□□ -1.76
CDR1-202ENST00000625883 CTF1Q16619 201 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 C15orf59Q2T9L4 293 aaPredicted RBP4.07□□□□□ -1.76
CDR1-202ENST00000625883 MYLK3Q32MK0 819 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 DAB2IPQ5VWQ8 1189 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 ADALQ6DHV7 355 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 WDR73Q6P4I2 378 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 SYT2Q8N9I0 419 aaPredicted RBP4.07□□□□□ -1.76
CDR1-202ENST00000625883 AVL9Q8NBF6 648 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 CLEC18CQ8NCF0 446 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 DUSP19Q8WTR2 217 aa4.07□□□□□ -1.76
CDR1-202ENST00000625883 PTPMT1Q8WUK0 201 aaPredicted RBP4.07□□□□□ -1.76
CDR1-202ENST00000625883 NSMCE1Q8WV22 266 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms