RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CREB5Q02930 508 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 ITGA9Q13797 1035 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 TYSND1Q2T9J0 566 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 GPR33Q49SQ1 333 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 HENMT1Q5T8I9 393 aaKnown RBP17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 KIAA1161Q6NSJ0 714 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 CYP4X1Q8N118 509 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 CYP8B1Q9UNU6 501 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 ZFR2Q9UPR6 939 aaKnown RBP17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 BDP1A6H8Y1 2624 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 IQANK1A0A1B0GTG1 560 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 A0A1W2PQU0 124 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 PFDN6O15212 129 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 NDUFS3O75489 264 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 KRT37O76014 449 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 KRT38O76015 456 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 HAUS5O94927 633 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 ACSL1P33121 698 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 SPRP35270 261 aaPredicted RBP17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 LEPRP48357 1165 aaKnown RBP17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 CD151P48509 253 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 TTPAP49638 278 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 BMPR2Q13873 1038 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 ATP13A5Q4VNC0 1218 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 SETMARQ53H47 684 aaPredicted RBP17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 TTMPQ5BVD1 217 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 ZNF789Q5FWF6 425 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 LGSNQ5TDP6 509 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 ZNF765Q7L2R6 523 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 GALNT7Q86SF2 657 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 ZC3HC1Q86WB0 502 aaKnown RBP17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 TRAM1L1Q8N609 369 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 ARL8AQ96BM9 186 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 PGM2Q96G03 612 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 TCF12Q99081 682 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 ZSCAN5AQ9BUG6 496 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 TPSD1Q9BZJ3 242 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 KDM4CQ9H3R0 1056 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 SGK2Q9HBY8 427 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 DLGAP2Q9P1A6 1054 aa17.7■□□□□ 0.42
PTCHD3-202ENST00000622555 TRBV5-4A0A0C4DH59 114 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 LRRC72A6NJI9 287 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 IGLV3-19P01714 112 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 ITGA2BP08514 1039 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 KRT15P19012 456 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 CA5AP35218 305 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 PXNP49023 591 aaPredicted RBP17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 LIMK2P53671 638 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 SGCGQ13326 291 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 MROH9Q5TGP6 573 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 NEK5Q6P3R8 708 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 CNSTQ6PJW8 725 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 CERS6Q6ZMG9 384 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 SERPINA9Q86WD7 417 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 HORMAD1Q86X24 394 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 CAMKK1Q8N5S9 505 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 OR2T34Q8NGX1 318 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 DTX3LQ8TDB6 740 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 SCG3Q8WXD2 468 aaKnown RBP17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 KLK6Q92876 244 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 ULK4Q96C45 1275 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 VPS39Q96JC1 886 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 TTC1Q99614 292 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 RHOJQ9H4E5 214 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 INTS10Q9NVR2 710 aaKnown RBP17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 BPTFQ12830 3046 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 TMEM221A6NGB7 291 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 TRIM49D1C9J1S8 452 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 M0R296 226 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 ZNF217O75362 1048 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 SNRPAP09012 282 aaKnown RBP17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 AOC1P19801 751 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 CNTFP26441 200 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 PPARGP37231 505 aaPredicted RBP17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 CCR3P51677 355 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 PPP2CBP62714 309 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 PPP2CAP67775 309 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 DBN1Q16643 649 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 TMEM259Q4ZIN3 620 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 RNF187Q5TA31 235 aaPredicted RBP17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 LYPLAL1Q5VWZ2 237 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 NXPE1Q8N323 547 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 PKNOX2Q96KN3 472 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 MCMBPQ9BTE3 642 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 STMN4Q9H169 189 aaPredicted RBP17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 KCTD5Q9NXV2 234 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 VPS9D1Q9Y2B5 631 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 CRYL1Q9Y2S2 319 aa17.69■□□□□ 0.42
PTCHD3-202ENST00000622555 UBA6A0AVT1 1052 aaPredicted RBP17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 FADS2P1A8MWK0 482 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 FOXO6A8MYZ6 492 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 SEMA4FO95754 770 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 ACRV1P26436 265 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 ATP5DP30049 168 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 OXTRP30559 389 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 MAT2AP31153 395 aaKnown RBP17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 DPTQ07507 201 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 AGBL2Q5U5Z8 902 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 RAET1GQ6H3X3 334 aa17.68■□□□□ 0.42
PTCHD3-202ENST00000622555 TOE1Q96GM8 510 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms