RNA–Protein interactions for RNA: ENST00000621774.4

NME4-212, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 3 BASIC

Gene NME4, Length 904 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-212ENST00000621774 TEKT4Q8WW24 435 aa17.12■□□□□ 0.33
NME4-212ENST00000621774 RNF31Q96EP0 1072 aa17.12■□□□□ 0.33
NME4-212ENST00000621774 GPN2Q9H9Y4 310 aaPredicted RBP17.12■□□□□ 0.33
NME4-212ENST00000621774 MRPL47Q9HD33 250 aaKnown RBP17.12■□□□□ 0.33
NME4-212ENST00000621774 SARS2Q9NP81 518 aaKnown RBP17.12■□□□□ 0.33
NME4-212ENST00000621774 FBXO8Q9NRD0 319 aa17.12■□□□□ 0.33
NME4-212ENST00000621774 KCNK6Q9Y257 313 aa17.12■□□□□ 0.33
NME4-212ENST00000621774 UTP20O75691 2785 aaKnown RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 FADS2P1A8MWK0 482 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 MFSD11O43934 449 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 MYBL1P10243 752 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 ZNF30P17039 623 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 MAP4P27816 1152 aaKnown RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 PPM1FP49593 454 aaPredicted RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 ARSEP51690 589 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 FOXK1P85037 733 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 KLHL30Q0D2K2 578 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 ATP13A4Q4VNC1 1196 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 FAM182AQ5T1J6 154 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 ALG1LQ6GMV1 187 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 CPNE8Q86YQ8 564 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 FAM71BQ8TC56 605 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 MAML1Q92585 1016 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 NAP1L5Q96NT1 182 aaPredicted RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 CATSPER2Q96P56 530 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 TEFMQ96QE5 360 aaKnown RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 TBC1D10AQ9BXI6 508 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 TDRD1Q9BXT4 1180 aaKnown RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 POLR1EQ9GZS1 481 aaKnown RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 ANKMY1Q9P2S6 941 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 KLHL3Q9UH77 587 aa17.11■□□□□ 0.33
NME4-212ENST00000621774 TMEM184BQ9Y519 407 aaPredicted RBP17.11■□□□□ 0.33
NME4-212ENST00000621774 CAPN5O15484 640 aaPredicted RBP17.1■□□□□ 0.33
NME4-212ENST00000621774 STK17BO94768 372 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 ACP5P13686 325 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 F8A1P23610 371 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 SERPINB6P35237 376 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 CASRP41180 1078 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 GARSP41250 739 aaKnown RBP17.1■□□□□ 0.33
NME4-212ENST00000621774 MAPK9P45984 424 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 EPHB1P54762 984 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 GALNT2Q10471 571 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 CDC20Q12834 499 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 UBAP2LQ14157 1087 aaKnown RBP17.1■□□□□ 0.33
NME4-212ENST00000621774 PIGHQ14442 188 aaPredicted RBP17.1■□□□□ 0.33
NME4-212ENST00000621774 DEFB109BQ30KR1 87 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 NCBP2-AS2Q69YL0 99 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 CEACAM20Q6UY09 585 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 NDUFAF2Q8N183 169 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 THAP2Q9H0W7 228 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 RBM22Q9NW64 420 aaKnown RBP eCLIP17.1■□□□□ 0.335e-8■□□□□ 8.7
NME4-212ENST00000621774 VPS18Q9P253 973 aa17.1■□□□□ 0.33
NME4-212ENST00000621774 MRPS18BQ9Y676 258 aaKnown RBP17.1■□□□□ 0.33
NME4-212ENST00000621774 USP9YO00507 2555 aaPredicted RBP17.1■□□□□ 0.33
NME4-212ENST00000621774 USP9XQ93008 2570 aaPredicted RBP17.09■□□□□ 0.33
NME4-212ENST00000621774 CLEC18AA5D8T8 446 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 MATN3O15232 486 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 SNX2O60749 519 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 DLGAP3O95886 979 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 PYGLP06737 847 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 SPINT3P49223 89 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 ABHD18Q0P651 414 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 PAFAH1B3Q15102 231 aaKnown RBP17.09■□□□□ 0.33
NME4-212ENST00000621774 ZNF648Q5T619 568 aaPredicted RBP17.09■□□□□ 0.33
NME4-212ENST00000621774 HENMT1Q5T8I9 393 aaKnown RBP17.09■□□□□ 0.33
NME4-212ENST00000621774 HGSNATQ68CP4 663 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 CLEC18BQ6UXF7 455 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 LRRC49Q8IUZ0 686 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 NIPA2Q8N8Q9 360 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 CLEC18CQ8NCF0 446 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 C9orf43Q8TAL5 461 aaPredicted RBP17.09■□□□□ 0.33
NME4-212ENST00000621774 EID2BQ96D98 161 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 TRIM11Q96F44 468 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 ABHD17AQ96GS6 310 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 LYSMD1Q96S90 227 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 PRDM8Q9NQV8 689 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 SIDT1Q9NXL6 827 aaKnown RBP17.09■□□□□ 0.33
NME4-212ENST00000621774 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 OGFRQ9NZT2 677 aa17.09■□□□□ 0.33
NME4-212ENST00000621774 SCHIP1Q9P0W5 487 aaPredicted RBP17.09■□□□□ 0.33
NME4-212ENST00000621774 K7EM74 188 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 HLA-DQB2P05538 268 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 MMP2P08253 660 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 F3P13726 295 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 ZNF28P17035 718 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 GFERP55789 205 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 TYRO3Q06418 890 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 DPYSL3Q14195 570 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 KRT81Q14533 505 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 QPCTQ16769 361 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 LYSMD3Q7Z3D4 306 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 LPCAT1Q8NF37 534 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 KIAA1143Q96AT1 154 aaPredicted RBP17.08■□□□□ 0.32
NME4-212ENST00000621774 ZPBPQ9BS86 351 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 PCDH9Q9HC56 1237 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 ATXN10Q9UBB4 475 aa17.08■□□□□ 0.32
NME4-212ENST00000621774 CPNE7Q9UBL6 633 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms