RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 DPYSL5Q9BPU6 564 aa16.59■□□□□ 0.25
TARDBP-225ENST00000621715 ZMYND15Q9H091 742 aa16.59■□□□□ 0.25
TARDBP-225ENST00000621715 OGFRQ9NZT2 677 aa16.59■□□□□ 0.25
TARDBP-225ENST00000621715 ZNHIT2Q9UHR6 403 aa16.59■□□□□ 0.25
TARDBP-225ENST00000621715 CHKBQ9Y259 395 aa16.59■□□□□ 0.25
TARDBP-225ENST00000621715 PRRC2CQ9Y520 2896 aaKnown RBP16.58■□□□□ 0.25
TARDBP-225ENST00000621715 ZW10O43264 779 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 MFSD11O43934 449 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 CLDN7O95471 211 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 ACP5P13686 325 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 DESP17661 470 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 MAPK9P45984 424 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 GFERP55789 205 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 SLC25A11Q02978 314 aaKnown RBP16.58■□□□□ 0.24
TARDBP-225ENST00000621715 NIPAL4Q0D2K0 466 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 ZNF648Q5T619 568 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-225ENST00000621715 ZNF765Q7L2R6 523 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 TMEM135Q86UB9 458 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 CATSPER2Q96P56 530 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 ARFGAP3Q9NP61 516 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 SARS2Q9NP81 518 aaKnown RBP16.58■□□□□ 0.24
TARDBP-225ENST00000621715 FBXO8Q9NRD0 319 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 DTLQ9NZJ0 730 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 SCHIP1Q9P0W5 487 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-225ENST00000621715 ANAPC2Q9UJX6 822 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 MAN2B2Q9Y2E5 1009 aa16.58■□□□□ 0.24
TARDBP-225ENST00000621715 TNRC6AQ8NDV7 1962 aaKnown RBP16.58■□□□□ 0.24
TARDBP-225ENST00000621715 PRR19A6NJB7 356 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 ASMTLO95671 621 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 SKILP12757 684 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 MAP4P27816 1152 aaKnown RBP16.57■□□□□ 0.24
TARDBP-225ENST00000621715 ARL4AP40617 200 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 STAT5AP42229 794 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 PPM1FP49593 454 aaPredicted RBP16.57■□□□□ 0.24
TARDBP-225ENST00000621715 ZNF135P52742 658 aaPredicted RBP16.57■□□□□ 0.24
TARDBP-225ENST00000621715 CDH6P55285 790 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 LRP8Q14114 963 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 RALGPS1Q5JS13 557 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 HIST2H2BCQ6DN03 193 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 C16orf46Q6P387 395 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 NLRP8Q86W28 1048 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 EXD1Q8NHP7 514 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 ARRDC2Q8TBH0 407 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 EID2BQ96D98 161 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 TEFMQ96QE5 360 aaKnown RBP16.57■□□□□ 0.24
TARDBP-225ENST00000621715 TDRD1Q9BXT4 1180 aaKnown RBP16.57■□□□□ 0.24
TARDBP-225ENST00000621715 TP53TG5Q9Y2B4 290 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 NOTCH2Q04721 2471 aa16.57■□□□□ 0.24
TARDBP-225ENST00000621715 UNC79Q9P2D8 2635 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 MTSS1O43312 755 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 SNX2O60749 519 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 GZMAP12544 262 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 SH3BP2P78314 561 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 ABHD18Q0P651 414 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 ASIC2Q16515 512 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 HENMT1Q5T8I9 393 aaKnown RBP16.56■□□□□ 0.24
TARDBP-225ENST00000621715 ALG1LQ6GMV1 187 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 CEACAM20Q6UY09 585 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 APOBEC4Q8WW27 367 aaKnown RBP16.56■□□□□ 0.24
TARDBP-225ENST00000621715 MAML1Q92585 1016 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 MIB2Q96AX9 1013 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 PSMG3-AS1Q96PY0 264 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 PRDM8Q9NQV8 689 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 MYO6Q9UM54 1294 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 ADGRG1Q9Y653 693 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 SLC30A1Q9Y6M5 507 aa16.56■□□□□ 0.24
TARDBP-225ENST00000621715 MN1Q10571 1320 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-225ENST00000621715 CAPN5O15484 640 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-225ENST00000621715 PDGFAP04085 211 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 CCDC172P0C7W6 258 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 GP1BBP13224 206 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 ZNF30P17039 623 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
TARDBP-225ENST00000621715 PRKCIP41743 596 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 ARSEP51690 589 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 UBE2IP63279 158 aaKnown RBP16.55■□□□□ 0.24
TARDBP-225ENST00000621715 ITKQ08881 620 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 GALNT2Q10471 571 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 PEX6Q13608 980 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 ATP13A4Q4VNC1 1196 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 LACTB2Q53H82 288 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-225ENST00000621715 BOLA3Q53S33 107 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 NCBP2-AS2Q69YL0 99 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 AOPEPQ8N6M6 819 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 KIAA1143Q96AT1 154 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-225ENST00000621715 BRD8Q9H0E9 1235 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 ISCUQ9H1K1 167 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 RTN4Q9NQC3 1192 aaKnown RBP16.55■□□□□ 0.24
TARDBP-225ENST00000621715 AIPL1Q9NZN9 384 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 VPS18Q9P253 973 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 ATXN10Q9UBB4 475 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 CPNE7Q9UBL6 633 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 SLC23A2Q9UGH3 650 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 KCNMB2Q9Y691 235 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 RPS6KL1Q9Y6S9 549 aa16.55■□□□□ 0.24
TARDBP-225ENST00000621715 POLR1CO15160 346 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-225ENST00000621715 HLA-DQB2P05538 268 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 MMP2P08253 660 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 F3P13726 295 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 ZNF8P17098 575 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms