RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MCEEQ96PE7 176 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 TEFMQ96QE5 360 aaKnown RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 DPYSL5Q9BPU6 564 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 RHOXF2Q9BQY4 288 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SP110Q9HB58 689 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SEPT11Q9NVA2 429 aaKnown RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 TMEM9Q9P0T7 183 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 B4GALT6Q9UBX8 382 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 PILRAQ9UKJ1 303 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 VPS9D1Q9Y2B5 631 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 MAN2B2Q9Y2E5 1009 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SAR1BQ9Y6B6 198 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 DUSP10Q9Y6W6 482 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 ICE1Q9Y2F5 2266 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SIGLEC16A6NMB1 481 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 B4E171 279 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 DFFAO00273 331 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 TRAFD1O14545 582 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 PPM1DO15297 605 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 NKX2-8O15522 239 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 PJA2O43164 708 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 DAPK3O43293 454 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 ERLIN1O75477 346 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 FUCA1P04066 466 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 UNGP13051 313 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 CHRNB2P17787 502 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 GM2AP17900 193 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 NFKBIAP25963 317 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 MAN1A1P33908 653 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 HTR7P34969 479 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SOX5P35711 763 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 TSPAN7P41732 249 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 ACTR1BP42025 376 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 ACTR1AP61163 376 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 POLR2FP61218 127 aaKnown RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 CTBSQ01459 385 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 CDC20Q12834 499 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 PTP4A2Q12974 167 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 CASP8Q14790 479 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 C4orf17Q53FE4 359 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SNAP47Q5SQN1 464 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 RAET1GQ6H3X3 334 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 DNAJC24Q6P3W2 148 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 DOK6Q6PKX4 331 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 UNC5BQ8IZJ1 945 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 OR10G6Q8NH81 332 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 ABHD17AQ96GS6 310 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 EFHD1Q9BUP0 239 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 TEX101Q9BY14 249 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 SLC39A8Q9C0K1 460 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 VIPAS39Q9H9C1 493 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 NLRC4Q9NPP4 1024 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 FAM207AQ9NSI2 230 aaPredicted RBP7.8□□□□□ -1.16
CLK1-215ENST00000621181 OCIAD1Q9NX40 245 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 KCTD5Q9NXV2 234 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 PLAAQ9Y263 795 aa7.8□□□□□ -1.16
CLK1-215ENST00000621181 USP9XQ93008 2570 aaPredicted RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 PRR19A6NJB7 356 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 A8MU76 341 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 EEF2KO00418 725 aaKnown RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 KRT86O43790 486 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 DUX1O43812 170 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 MAP4P27816 1152 aaKnown RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 ADCY8P40145 1251 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 ETV3P41162 512 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 HNRNPH2P55795 449 aaKnown RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 AP1S1P61966 158 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 RPL7AP62424 266 aaKnown RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 NSUN2Q08J23 767 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLK1-215ENST00000621181 RFTN1Q14699 578 aaPredicted RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 LACTB2Q53H82 288 aaPredicted RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 HGSNATQ68CP4 663 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 TMEM71Q6P5X7 295 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 DCUN1D2Q6PH85 259 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 ZNF761Q86XN6 746 aaPredicted RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 CREG2Q8IUH2 290 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 STARD8Q92502 1023 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 RTP4Q96DX8 246 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 COQ10AQ96MF6 247 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 SLC38A3Q99624 504 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 CTRCQ99895 268 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 CNPY3Q9BT09 278 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 FRMD8Q9BZ67 464 aaPredicted RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 GANQ9H2C0 597 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 LRRC4CQ9HCJ2 640 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 ADAM21Q9UKJ8 722 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 AP4E1Q9UPM8 1137 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 ST14Q9Y5Y6 855 aa7.79□□□□□ -1.16
CLK1-215ENST00000621181 UTP20O75691 2785 aaKnown RBP7.79□□□□□ -1.16
CLK1-215ENST00000621181 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 CCDC66A2RUB6 948 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 BLACEA4D250 179 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CLEC18AA5D8T8 446 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 C3orf80F5H4A9 247 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 FASLGP48023 281 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 POLD2P49005 469 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 RENBPP51606 427 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 GYS2P54840 703 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 MC1RQ01726 317 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 SQSTM1Q13501 440 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms